CPF_0841 protein (Clostridium perfringens ATCC 13124)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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[Homology]

Score

CPF_0841

ABC transporter, ATP-binding protein; Identified by similarity to SP:O34697; match to protein family HMM PF00005. (255 aa)

Predicted Functional Partners:

CPF_0746

0.961

CPF_0119

0.956

CPF_1791

0.941

CPF_0837

0.911

CPF_0116

0.897

CPF_1201

0.764

CPF_0175

0.737

CPF_0703

0.709

CPF_0836

0.652

CPF_0115

0.601

Your Current Organism:

Clostridium perfringens ATCC 13124

NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CPF_0115	CPF_0116	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	0.964
CPF_0115	CPF_0119	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.680
CPF_0115	CPF_0837	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	0.849
CPF_0115	CPF_0841	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	ABC transporter, ATP-binding protein; Identified by similarity to SP:O34697; match to protein family HMM PF00005.	0.601
CPF_0116	CPF_0115	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.964
CPF_0116	CPF_0119	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.933
CPF_0116	CPF_0746	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.405
CPF_0116	CPF_0836	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.845
CPF_0116	CPF_0841	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	ABC transporter, ATP-binding protein; Identified by similarity to SP:O34697; match to protein family HMM PF00005.	0.897
CPF_0119	CPF_0115	Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.680
CPF_0119	CPF_0116	Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	0.933
CPF_0119	CPF_0836	Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	0.654
CPF_0119	CPF_0837	Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	0.933
CPF_0119	CPF_0841	Putative ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	ABC transporter, ATP-binding protein; Identified by similarity to SP:O34697; match to protein family HMM PF00005.	0.956
CPF_0175	CPF_0841	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by similarity to SP:O34697; match to protein family HMM PF00005.	0.737
CPF_0703	CPF_0841	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by similarity to SP:O34697; match to protein family HMM PF00005.	0.709
CPF_0746	CPF_0116	ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	0.405
CPF_0746	CPF_0837	ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.	0.400
CPF_0746	CPF_0841	ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	ABC transporter, ATP-binding protein; Identified by similarity to SP:O34697; match to protein family HMM PF00005.	0.961
CPF_0836	CPF_0116	DNA-binding response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	0.845

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