Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CPF_0850 | CPF_0851 | CPF_0850 | CPF_0851 | NADH-dependent butanol dehydrogenase; Identified by similarity to SP:Q04944; match to protein family HMM PF00465. | Putative carbohydrate diacid regulator; Identified by similarity to SP:P37047; match to protein family HMM PF05651. | 0.402 |
CPF_0851 | CPF_0850 | CPF_0851 | CPF_0850 | Putative carbohydrate diacid regulator; Identified by similarity to SP:P37047; match to protein family HMM PF05651. | NADH-dependent butanol dehydrogenase; Identified by similarity to SP:Q04944; match to protein family HMM PF00465. | 0.402 |
CPF_0851 | CPF_0853 | CPF_0851 | CPF_0853 | Putative carbohydrate diacid regulator; Identified by similarity to SP:P37047; match to protein family HMM PF05651. | Putative permease protein; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600. | 0.877 |
CPF_0851 | CPF_1006 | CPF_0851 | CPF_1006 | Putative carbohydrate diacid regulator; Identified by similarity to SP:P37047; match to protein family HMM PF05651. | Conserved hypothetical protein; Identified by similarity to PIR:D90881; match to protein family HMM PF02698. | 0.408 |
CPF_0851 | CPF_2653 | CPF_0851 | CPF_2653 | Putative carbohydrate diacid regulator; Identified by similarity to SP:P37047; match to protein family HMM PF05651. | Conserved hypothetical protein; Identified by similarity to PIR:H97297. | 0.569 |
CPF_0851 | glxK | CPF_0851 | CPF_0854 | Putative carbohydrate diacid regulator; Identified by similarity to SP:P37047; match to protein family HMM PF05651. | Glycerate kinase; Identified by similarity to SP:Q9Z9P2; match to protein family HMM PF02595; match to protein family HMM TIGR00045; Belongs to the glycerate kinase type-1 family. | 0.732 |
CPF_0853 | CPF_0851 | CPF_0853 | CPF_0851 | Putative permease protein; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600. | Putative carbohydrate diacid regulator; Identified by similarity to SP:P37047; match to protein family HMM PF05651. | 0.877 |
CPF_0853 | glxK | CPF_0853 | CPF_0854 | Putative permease protein; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600. | Glycerate kinase; Identified by similarity to SP:Q9Z9P2; match to protein family HMM PF02595; match to protein family HMM TIGR00045; Belongs to the glycerate kinase type-1 family. | 0.901 |
CPF_1006 | CPF_0851 | CPF_1006 | CPF_0851 | Conserved hypothetical protein; Identified by similarity to PIR:D90881; match to protein family HMM PF02698. | Putative carbohydrate diacid regulator; Identified by similarity to SP:P37047; match to protein family HMM PF05651. | 0.408 |
CPF_2653 | CPF_0851 | CPF_2653 | CPF_0851 | Conserved hypothetical protein; Identified by similarity to PIR:H97297. | Putative carbohydrate diacid regulator; Identified by similarity to SP:P37047; match to protein family HMM PF05651. | 0.569 |
glxK | CPF_0851 | CPF_0854 | CPF_0851 | Glycerate kinase; Identified by similarity to SP:Q9Z9P2; match to protein family HMM PF02595; match to protein family HMM TIGR00045; Belongs to the glycerate kinase type-1 family. | Putative carbohydrate diacid regulator; Identified by similarity to SP:P37047; match to protein family HMM PF05651. | 0.732 |
glxK | CPF_0853 | CPF_0854 | CPF_0853 | Glycerate kinase; Identified by similarity to SP:Q9Z9P2; match to protein family HMM PF02595; match to protein family HMM TIGR00045; Belongs to the glycerate kinase type-1 family. | Putative permease protein; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600. | 0.901 |