STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPF_0889Sensor histidine kinase; Identified by match to protein family HMM PF02518; match to protein family HMM PF07568. (475 aa)    
Predicted Functional Partners:
CPF_0888
Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF03861.
 
   
 0.973
eutP
Ethanolamine utilization protein, EutP; Identified by similarity to GB:AAN81436.1; match to protein family HMM TIGR02528; Belongs to the EutP/PduV family.
 
   
 0.928
eutS
Ethanolamine utilization protein EutS; Identified by match to protein family HMM PF00936.
 
   
 0.915
eutA
Ethanolamine utilization protein EutA; Identified by similarity to SP:Q9ZFV2; match to protein family HMM PF06277.
 
   
 0.897
eutL
Ethanolamine utilization protein EutL; Identified by similarity to SP:Q9ZFU9; match to protein family HMM PF00936.
 
   
 0.855
eutC
Ethanolamine ammonia-lyase, small subunit; Identified by similarity to SP:P19636; match to protein family HMM PF05985; Belongs to the EutC family.
 
   
 0.827
CPF_0903
Ethanolamine utilization protein EutQ; Identified by match to protein family HMM PF05899; match to protein family HMM PF06249.
 
   
 0.823
eutT
cob(I)yrinic acid a,c-diamide adenosyltransferase; Identified by similarity to SP:Q9ZFV4; match to protein family HMM PF01923.
 
     0.792
CPF_0902
Ethanolamine utilization protein EutH; Identified by similarity to SP:P41796; match to protein family HMM PF04346.
 
   
 0.776
CPF_0899
Putative ethanolamine utilization protein; Identified by similarity to GB:AAO36658.1; match to protein family HMM TIGR02536.
 
     0.761
Your Current Organism:
Clostridium perfringens ATCC 13124
NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124
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