Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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CPF_0914Capsular polysaccharide biosynthesis protein; Identified by match to protein family HMM PF00534. (375 aa)    
Predicted Functional Partners:
CPF_0915
Putative polysaccharide polymerase protein; Identified by similarity to GB:AAM94575.1.
 
  
 0.853
CPF_0911
Aminotransferase, DegT/DnrJ/EryC1/StrS family; Identified by similarity to GB:AAD45657.1; match to protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.798
CPF_0912
Bacterial sugar transferase family protein; Identified by similarity to GB:AAG17415.1; match to protein family HMM PF02397.
 
  
 0.798
CPF_0913
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.
     
 0.775
CPF_0916
Putative capsular polysaccharide transporter protein; Identified by match to protein family HMM PF01943.
  
  
 0.751
CPF_0910
Capsular polysaccharide biosynthesis protein; Identified by similarity to SP:P39853; match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.
 
  
 0.696
CPF_0918
Capsule chain length determinant protein; Identified by match to protein family HMM PF02706.
 
  
 0.683
CPF_0919
Tyrosine-protein kinase protein; Identified by similarity to SP:P39851; match to protein family HMM TIGR01007.
 
  
 0.662
CPF_0917
licD family protein; Identified by similarity to GB:AAD37094.1; match to protein family HMM PF04991.
       0.604
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.565
Your Current Organism:
Clostridium perfringens ATCC 13124
NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124
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