Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CPF_1308 | CPF_1309 | Thiosulfate sulfurtransferase homolog; Identified by similarity to GB:CAB88023.1; match to protein family HMM PF00581. | Hypothetical protein; Identified by glimmer; putative. | 0.783 |
CPF_1308 | CPF_1310 | Thiosulfate sulfurtransferase homolog; Identified by similarity to GB:CAB88023.1; match to protein family HMM PF00581. | Conserved hypothetical protein; Identified by similarity to PIR:D97107. | 0.405 |
CPF_1309 | CPF_1308 | Hypothetical protein; Identified by glimmer; putative. | Thiosulfate sulfurtransferase homolog; Identified by similarity to GB:CAB88023.1; match to protein family HMM PF00581. | 0.783 |
CPF_1309 | CPF_1310 | Hypothetical protein; Identified by glimmer; putative. | Conserved hypothetical protein; Identified by similarity to PIR:D97107. | 0.405 |
CPF_1310 | CPF_1308 | Conserved hypothetical protein; Identified by similarity to PIR:D97107. | Thiosulfate sulfurtransferase homolog; Identified by similarity to GB:CAB88023.1; match to protein family HMM PF00581. | 0.405 |
CPF_1310 | CPF_1309 | Conserved hypothetical protein; Identified by similarity to PIR:D97107. | Hypothetical protein; Identified by glimmer; putative. | 0.405 |
CPF_1310 | CPF_1311 | Conserved hypothetical protein; Identified by similarity to PIR:D97107. | Identified by match to protein family HMM PF03372. | 0.449 |
CPF_1311 | CPF_1310 | Identified by match to protein family HMM PF03372. | Conserved hypothetical protein; Identified by similarity to PIR:D97107. | 0.449 |