Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CPF_1472Putative alpha-N-acetylgalactosaminidase; Identified by similarity to GB:AAM55479.1; match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF07554. (1588 aa)    
Predicted Functional Partners:
CPF_1473
Conserved hypothetical protein.
 
   
 0.752
nagH
Hyaluronoglucosaminidase; Identified by similarity to SP:P26831; match to protein family HMM PF00404; match to protein family HMM PF00754; match to protein family HMM PF07554; match to protein family HMM PF07555.
  
     0.751
CPF_1487
Putative hyaluronoglucosaminidase; Identified by similarity to SP:P26831; match to protein family HMM PF00746; match to protein family HMM PF00754; match to protein family HMM PF07554; match to protein family HMM PF07555; match to protein family HMM TIGR01167.
  
     0.613
CPF_0875
Putative O-GlcNAcase nagJ; Identified by similarity to SP:Q0TR53; match to protein family HMM PF00754; match to protein family HMM PF02838; match to protein family HMM PF07555; match to protein family HMM TIGR01167.
  
     0.503
CPF_1759
BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012.
 
     0.484
lacZ-2
Beta-galactosidase; Identified by similarity to SP:P26257; match to protein family HMM PF00404; match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; match to protein family HMM PF07532; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.444
nanI
Sialidase; Identified by similarity to SP:Q54727; similarity to PDB:2BF6_A; match to protein family HMM PF02012; match to protein family HMM PF02973.
  
     0.442
CPF_1301
Glycosyl hydrolase, family 31/fibronectin type III domain protein; Identified by similarity to SP:Q9F234; match to protein family HMM PF00041; match to protein family HMM PF00754; match to protein family HMM PF01055; match to protein family HMM PF02368; match to protein family HMM PF07554.
 
   
0.407
Your Current Organism:
Clostridium perfringens ATCC 13124
NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124
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