CPF_1538 protein (Clostridium perfringens ATCC 13124)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

CPF_1538

Rubrerythrin; Identified by match to protein family HMM PF02915. (178 aa)

Predicted Functional Partners:

CPF_1537

0.783

spoVR

0.700

yhbH

0.643

prkA

0.643

recQ-2

0.427

Your Current Organism:

Clostridium perfringens ATCC 13124

NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPF_1537	CPF_1538	CPF_1537	CPF_1538	Conserved hypothetical protein; Identified by similarity to GB:AAO34984.1.	Rubrerythrin; Identified by match to protein family HMM PF02915.	0.783
CPF_1537	prkA	CPF_1537	CPF_1541	Conserved hypothetical protein; Identified by similarity to GB:AAO34984.1.	Serine protein kinase; Identified by similarity to PIR:JC4602; match to protein family HMM PF06798; match to protein family HMM PF08298.	0.578
CPF_1537	spoVR	CPF_1537	CPF_1539	Conserved hypothetical protein; Identified by similarity to GB:AAO34984.1.	Stage V sporulation protein R; Identified by similarity to SP:P37875; match to protein family HMM PF04293.	0.656
CPF_1537	yhbH	CPF_1537	CPF_1540	Conserved hypothetical protein; Identified by similarity to GB:AAO34984.1.	Sporulation protein YhbH; Identified by match to protein family HMM PF04285; match to protein family HMM TIGR02877; Belongs to the UPF0229 family.	0.582
CPF_1538	CPF_1537	CPF_1538	CPF_1537	Rubrerythrin; Identified by match to protein family HMM PF02915.	Conserved hypothetical protein; Identified by similarity to GB:AAO34984.1.	0.783
CPF_1538	prkA	CPF_1538	CPF_1541	Rubrerythrin; Identified by match to protein family HMM PF02915.	Serine protein kinase; Identified by similarity to PIR:JC4602; match to protein family HMM PF06798; match to protein family HMM PF08298.	0.643
CPF_1538	recQ-2	CPF_1538	CPF_1542	Rubrerythrin; Identified by match to protein family HMM PF02915.	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389.	0.427
CPF_1538	spoVR	CPF_1538	CPF_1539	Rubrerythrin; Identified by match to protein family HMM PF02915.	Stage V sporulation protein R; Identified by similarity to SP:P37875; match to protein family HMM PF04293.	0.700
CPF_1538	yhbH	CPF_1538	CPF_1540	Rubrerythrin; Identified by match to protein family HMM PF02915.	Sporulation protein YhbH; Identified by match to protein family HMM PF04285; match to protein family HMM TIGR02877; Belongs to the UPF0229 family.	0.643
prkA	CPF_1537	CPF_1541	CPF_1537	Serine protein kinase; Identified by similarity to PIR:JC4602; match to protein family HMM PF06798; match to protein family HMM PF08298.	Conserved hypothetical protein; Identified by similarity to GB:AAO34984.1.	0.578
prkA	CPF_1538	CPF_1541	CPF_1538	Serine protein kinase; Identified by similarity to PIR:JC4602; match to protein family HMM PF06798; match to protein family HMM PF08298.	Rubrerythrin; Identified by match to protein family HMM PF02915.	0.643
prkA	recQ-2	CPF_1541	CPF_1542	Serine protein kinase; Identified by similarity to PIR:JC4602; match to protein family HMM PF06798; match to protein family HMM PF08298.	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389.	0.581
prkA	spoVR	CPF_1541	CPF_1539	Serine protein kinase; Identified by similarity to PIR:JC4602; match to protein family HMM PF06798; match to protein family HMM PF08298.	Stage V sporulation protein R; Identified by similarity to SP:P37875; match to protein family HMM PF04293.	0.994
prkA	yhbH	CPF_1541	CPF_1540	Serine protein kinase; Identified by similarity to PIR:JC4602; match to protein family HMM PF06798; match to protein family HMM PF08298.	Sporulation protein YhbH; Identified by match to protein family HMM PF04285; match to protein family HMM TIGR02877; Belongs to the UPF0229 family.	0.995
recQ-2	CPF_1538	CPF_1542	CPF_1538	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389.	Rubrerythrin; Identified by match to protein family HMM PF02915.	0.427
recQ-2	prkA	CPF_1542	CPF_1541	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389.	Serine protein kinase; Identified by similarity to PIR:JC4602; match to protein family HMM PF06798; match to protein family HMM PF08298.	0.581
recQ-2	spoVR	CPF_1542	CPF_1539	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389.	Stage V sporulation protein R; Identified by similarity to SP:P37875; match to protein family HMM PF04293.	0.524
recQ-2	yhbH	CPF_1542	CPF_1540	ATP-dependent DNA helicase RecQ; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389.	Sporulation protein YhbH; Identified by match to protein family HMM PF04285; match to protein family HMM TIGR02877; Belongs to the UPF0229 family.	0.572
spoVR	CPF_1537	CPF_1539	CPF_1537	Stage V sporulation protein R; Identified by similarity to SP:P37875; match to protein family HMM PF04293.	Conserved hypothetical protein; Identified by similarity to GB:AAO34984.1.	0.656
spoVR	CPF_1538	CPF_1539	CPF_1538	Stage V sporulation protein R; Identified by similarity to SP:P37875; match to protein family HMM PF04293.	Rubrerythrin; Identified by match to protein family HMM PF02915.	0.700