CPF_1583 protein (Clostridium perfringens ATCC 13124)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

CPF_1583

Phage protein, QlrG family; Identified by match to protein family HMM TIGR01560. (92 aa)

Predicted Functional Partners:

CPF_1582

0.948

CPF_1586

0.919

CPF_1584

0.879

CPF_1580

0.804

CPF_1579

0.783

CPF_1574

0.776

CPF_1581

0.773

CPF_1578

0.737

CPF_1575

0.710

CPF_1585

0.710

Your Current Organism:

Clostridium perfringens ATCC 13124

NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CPF_1574	CPF_1575	Putative phage structural protein; Identified by match to protein family HMM PF01551; match to protein family HMM TIGR01665.	Putative phage tail component; Identified by match to protein family HMM TIGR01633.	0.947
CPF_1574	CPF_1578	Putative phage structural protein; Identified by match to protein family HMM PF01551; match to protein family HMM TIGR01665.	Conserved hypothetical protein; Identified by similarity to GB:AAL96782.1.	0.410
CPF_1574	CPF_1579	Putative phage structural protein; Identified by match to protein family HMM PF01551; match to protein family HMM TIGR01665.	Phage major tail protein, phi13 family; Identified by match to protein family HMM TIGR01603.	0.559
CPF_1574	CPF_1580	Putative phage structural protein; Identified by match to protein family HMM PF01551; match to protein family HMM TIGR01665.	Conserved hypothetical protein; Identified by similarity to GB:AAL96780.1.	0.483
CPF_1574	CPF_1582	Putative phage structural protein; Identified by match to protein family HMM PF01551; match to protein family HMM TIGR01665.	Putative phage head-tail adaptor; Identified by match to protein family HMM TIGR01563.	0.432
CPF_1574	CPF_1583	Putative phage structural protein; Identified by match to protein family HMM PF01551; match to protein family HMM TIGR01665.	Phage protein, QlrG family; Identified by match to protein family HMM TIGR01560.	0.776
CPF_1574	CPF_1584	Putative phage structural protein; Identified by match to protein family HMM PF01551; match to protein family HMM TIGR01665.	Phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554.	0.452
CPF_1574	CPF_1586	Putative phage structural protein; Identified by match to protein family HMM PF01551; match to protein family HMM TIGR01665.	Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.	0.644
CPF_1575	CPF_1574	Putative phage tail component; Identified by match to protein family HMM TIGR01633.	Putative phage structural protein; Identified by match to protein family HMM PF01551; match to protein family HMM TIGR01665.	0.947
CPF_1575	CPF_1578	Putative phage tail component; Identified by match to protein family HMM TIGR01633.	Conserved hypothetical protein; Identified by similarity to GB:AAL96782.1.	0.410
CPF_1575	CPF_1579	Putative phage tail component; Identified by match to protein family HMM TIGR01633.	Phage major tail protein, phi13 family; Identified by match to protein family HMM TIGR01603.	0.888
CPF_1575	CPF_1580	Putative phage tail component; Identified by match to protein family HMM TIGR01633.	Conserved hypothetical protein; Identified by similarity to GB:AAL96780.1.	0.557
CPF_1575	CPF_1582	Putative phage tail component; Identified by match to protein family HMM TIGR01633.	Putative phage head-tail adaptor; Identified by match to protein family HMM TIGR01563.	0.452
CPF_1575	CPF_1583	Putative phage tail component; Identified by match to protein family HMM TIGR01633.	Phage protein, QlrG family; Identified by match to protein family HMM TIGR01560.	0.710
CPF_1575	CPF_1584	Putative phage tail component; Identified by match to protein family HMM TIGR01633.	Phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554.	0.510
CPF_1575	CPF_1585	Putative phage tail component; Identified by match to protein family HMM TIGR01633.	Phage prohead protease, HK97 family; Identified by match to protein family HMM PF04586; match to protein family HMM TIGR01543.	0.513
CPF_1575	CPF_1586	Putative phage tail component; Identified by match to protein family HMM TIGR01633.	Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.	0.727
CPF_1578	CPF_1574	Conserved hypothetical protein; Identified by similarity to GB:AAL96782.1.	Putative phage structural protein; Identified by match to protein family HMM PF01551; match to protein family HMM TIGR01665.	0.410
CPF_1578	CPF_1575	Conserved hypothetical protein; Identified by similarity to GB:AAL96782.1.	Putative phage tail component; Identified by match to protein family HMM TIGR01633.	0.410
CPF_1578	CPF_1579	Conserved hypothetical protein; Identified by similarity to GB:AAL96782.1.	Phage major tail protein, phi13 family; Identified by match to protein family HMM TIGR01603.	0.773