CPF_1736 protein (Clostridium perfringens ATCC 13124)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Score

CPF_1736

ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (228 aa)

Predicted Functional Partners:

CPF_1737

0.995

CPF_1738

0.985

CPF_1791

0.731

CPF_1735

0.718

rpsE

0.526

CPF_1739

0.518

aspS

0.502

metG

0.496

ecfA2

0.471

rpsK

0.452

Your Current Organism:

Clostridium perfringens ATCC 13124

NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPF_1735	CPF_1736	CPF_1735	CPF_1736	Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.718
CPF_1735	CPF_1737	CPF_1735	CPF_1737	Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.718
CPF_1735	CPF_1738	CPF_1735	CPF_1738	Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797.	Conserved hypothetical protein; Identified by similarity to GB:AAS10709.1.	0.718
CPF_1735	CPF_1739	CPF_1735	CPF_1739	Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797.	Hypothetical protein; Identified by glimmer; putative.	0.485
CPF_1736	CPF_1735	CPF_1736	CPF_1735	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797.	0.718
CPF_1736	CPF_1737	CPF_1736	CPF_1737	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.995
CPF_1736	CPF_1738	CPF_1736	CPF_1738	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Conserved hypothetical protein; Identified by similarity to GB:AAS10709.1.	0.985
CPF_1736	CPF_1739	CPF_1736	CPF_1739	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Hypothetical protein; Identified by glimmer; putative.	0.518
CPF_1736	CPF_1791	CPF_1736	CPF_1791	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein; Identified by match to protein family HMM PF02687.	0.731
CPF_1736	aspS	CPF_1736	CPF_0770	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 2 subfamily.	0.502
CPF_1736	ecfA2	CPF_1736	CPF_2682	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.	0.471
CPF_1736	metG	CPF_1736	CPF_2846	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	methionyl-tRNA synthetase; Identified by match to protein family HMM PF09334; match to protein family HMM TIGR00398.	0.496
CPF_1736	rpsE	CPF_1736	CPF_2697	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.526
CPF_1736	rpsK	CPF_1736	CPF_2687	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.452
CPF_1737	CPF_1735	CPF_1737	CPF_1735	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797.	0.718
CPF_1737	CPF_1736	CPF_1737	CPF_1736	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.995
CPF_1737	CPF_1738	CPF_1737	CPF_1738	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	Conserved hypothetical protein; Identified by similarity to GB:AAS10709.1.	0.997
CPF_1737	CPF_1739	CPF_1737	CPF_1739	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	Hypothetical protein; Identified by glimmer; putative.	0.518
CPF_1738	CPF_1735	CPF_1738	CPF_1735	Conserved hypothetical protein; Identified by similarity to GB:AAS10709.1.	Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797.	0.718
CPF_1738	CPF_1736	CPF_1738	CPF_1736	Conserved hypothetical protein; Identified by similarity to GB:AAS10709.1.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.985