Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
noxANitrate reductase, NADH oxidase subunit; Identified by similarity to GB:BAA74793.1; match to protein family HMM PF00070; match to protein family HMM PF07992. (407 aa)    
Predicted Functional Partners:
narA
Nitrate reductase, catalytic subunit; Identified by similarity to GB:BAA74791.1; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.988
narB
Nitrate reductase electron transfer subunit; Identified by match to protein family HMM PF00037.
 
 
 
 0.969
CPF_0443
Putative sulfite/nitrite reductase; Identified by similarity to SP:Q05805; match to protein family HMM PF01077; match to protein family HMM PF03460.
 
     0.921
CPF_1076
[Fe] hydrogenase; Identified by match to protein family HMM PF00037; match to protein family HMM PF00301; match to protein family HMM PF02256; match to protein family HMM PF02906; match to protein family HMM PF02915; match to protein family HMM TIGR02512.
  
 
 0.805
CPF_0284
Identified by match to protein family HMM PF00258; match to protein family HMM PF00753.
  
 0.723
hcp
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.677
CPF_1160
Putative nitrite/sulfite reductase; Identified by similarity to SP:Q05805; match to protein family HMM PF01077; match to protein family HMM PF03460.
     0.635
mobB
Molybdopterin-guanine dinucleotide biosynthesis protein B; Identified by match to protein family HMM PF03205; match to protein family HMM TIGR00176.
 
     0.630
hemD
uroporphyrinogen-III methyltransferase/synthase; Identified by similarity to GB:AAK00606.1; match to protein family HMM PF00590; match to protein family HMM PF02602; match to protein family HMM TIGR01469.
  
  
 0.613
CPF_0779
Rubredoxin; Identified by match to protein family HMM PF00301.
  
 
 0.562
Your Current Organism:
Clostridium perfringens ATCC 13124
NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124
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