STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPF_2091Hypothetical protein; Identified by glimmer; putative. (146 aa)    
Predicted Functional Partners:
CPF_2090
Hypothetical protein; Identified by glimmer; putative.
       0.773
CPF_2092
Hypothetical protein; Identified by glimmer; putative.
       0.773
CPF_2093
Putative type IV pilin.
       0.773
CPF_2094
Hypothetical protein; Identified by glimmer; putative.
       0.773
CPF_2095
Hypothetical protein; Identified by glimmer; putative.
       0.596
CPF_2096
Putative type IV pilin; Identified by match to protein family HMM TIGR02532.
       0.560
CPF_2097
Putative pilus biogenesis protein; Identified by similarity to GB:AAA25733.1; match to protein family HMM PF00482.
       0.560
CPF_2098
Putative pilus biogenesis protein; Identified by match to protein family HMM PF00437.
       0.560
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
       0.462
Your Current Organism:
Clostridium perfringens ATCC 13124
NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.