ybeY protein (Clostridium perfringens ATCC 13124)

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ybeY

Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (168 aa)

Predicted Functional Partners:

era

0.993

CPF_2274

0.978

cdd

0.971

CPF_2276

0.867

rplQ

0.824

sodF

0.779

rpsQ

0.778

CPF_2277

0.751

yqfC

0.751

recO

0.738

Your Current Organism:

Clostridium perfringens ATCC 13124

NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPF_2274	CPF_2276	CPF_2274	CPF_2276	Identified by similarity to SP:P19638; match to protein family HMM PF01219; match to protein family HMM PF01569.	Putative hydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM PF07697; match to protein family HMM PF07698; match to protein family HMM TIGR00277.	0.825
CPF_2274	CPF_2277	CPF_2274	CPF_2277	Identified by similarity to SP:P19638; match to protein family HMM PF01219; match to protein family HMM PF01569.	Putative stage IV sporulation protein; Identified by match to protein family HMM PF06898; match to protein family HMM TIGR02876.	0.701
CPF_2274	cdd	CPF_2274	CPF_2273	Identified by similarity to SP:P19638; match to protein family HMM PF01219; match to protein family HMM PF01569.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.735
CPF_2274	era	CPF_2274	CPF_2272	Identified by similarity to SP:P19638; match to protein family HMM PF01219; match to protein family HMM PF01569.	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.806
CPF_2274	recO	CPF_2274	CPF_2271	Identified by similarity to SP:P19638; match to protein family HMM PF01219; match to protein family HMM PF01569.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.742
CPF_2274	ybeY	CPF_2274	CPF_2275	Identified by similarity to SP:P19638; match to protein family HMM PF01219; match to protein family HMM PF01569.	Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.978
CPF_2274	yqfC	CPF_2274	CPF_2278	Identified by similarity to SP:P19638; match to protein family HMM PF01219; match to protein family HMM PF01569.	Sporulation protein YqfC; Identified by similarity to PIR:B97059; match to protein family HMM PF07241; match to protein family HMM TIGR02856.	0.701
CPF_2276	CPF_2274	CPF_2276	CPF_2274	Putative hydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM PF07697; match to protein family HMM PF07698; match to protein family HMM TIGR00277.	Identified by similarity to SP:P19638; match to protein family HMM PF01219; match to protein family HMM PF01569.	0.825
CPF_2276	CPF_2277	CPF_2276	CPF_2277	Putative hydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM PF07697; match to protein family HMM PF07698; match to protein family HMM TIGR00277.	Putative stage IV sporulation protein; Identified by match to protein family HMM PF06898; match to protein family HMM TIGR02876.	0.751
CPF_2276	cdd	CPF_2276	CPF_2273	Putative hydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM PF07697; match to protein family HMM PF07698; match to protein family HMM TIGR00277.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.688
CPF_2276	era	CPF_2276	CPF_2272	Putative hydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM PF07697; match to protein family HMM PF07698; match to protein family HMM TIGR00277.	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.688
CPF_2276	recO	CPF_2276	CPF_2271	Putative hydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM PF07697; match to protein family HMM PF07698; match to protein family HMM TIGR00277.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.587
CPF_2276	ybeY	CPF_2276	CPF_2275	Putative hydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM PF07697; match to protein family HMM PF07698; match to protein family HMM TIGR00277.	Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.867
CPF_2276	yqfC	CPF_2276	CPF_2278	Putative hydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM PF07697; match to protein family HMM PF07698; match to protein family HMM TIGR00277.	Sporulation protein YqfC; Identified by similarity to PIR:B97059; match to protein family HMM PF07241; match to protein family HMM TIGR02856.	0.751
CPF_2277	CPF_2274	CPF_2277	CPF_2274	Putative stage IV sporulation protein; Identified by match to protein family HMM PF06898; match to protein family HMM TIGR02876.	Identified by similarity to SP:P19638; match to protein family HMM PF01219; match to protein family HMM PF01569.	0.701
CPF_2277	CPF_2276	CPF_2277	CPF_2276	Putative stage IV sporulation protein; Identified by match to protein family HMM PF06898; match to protein family HMM TIGR02876.	Putative hydrolase; Identified by match to protein family HMM PF01966; match to protein family HMM PF07697; match to protein family HMM PF07698; match to protein family HMM TIGR00277.	0.751
CPF_2277	cdd	CPF_2277	CPF_2273	Putative stage IV sporulation protein; Identified by match to protein family HMM PF06898; match to protein family HMM TIGR02876.	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.	0.632
CPF_2277	era	CPF_2277	CPF_2272	Putative stage IV sporulation protein; Identified by match to protein family HMM PF06898; match to protein family HMM TIGR02876.	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.632
CPF_2277	recO	CPF_2277	CPF_2271	Putative stage IV sporulation protein; Identified by match to protein family HMM PF06898; match to protein family HMM TIGR02876.	DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.	0.614
CPF_2277	ybeY	CPF_2277	CPF_2275	Putative stage IV sporulation protein; Identified by match to protein family HMM PF06898; match to protein family HMM TIGR02876.	Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.751

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