Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CPF_2365Hypothetical protein; Identified by glimmer; putative. (348 aa)    
Predicted Functional Partners:
CPF_2364
Conserved hypothetical protein; Identified by similarity to GB:AAO36386.1; match to protein family HMM PF07550.
       0.757
CPF_2362
Conserved hypothetical protein; Identified by similarity to GB:AAM25615.1; match to protein family HMM PF07009.
       0.453
CPF_2363
Putative thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.453
CPF_2366
Conserved hypothetical protein; Identified by similarity to GB:AAO81374.1.
       0.445
CPF_2361
Putative membrane protein; Identified by similarity to GB:AAO35611.1; match to protein family HMM PF07456.
       0.432
Your Current Organism:
Clostridium perfringens ATCC 13124
NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124
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