CPF_2371 protein (Clostridium perfringens ATCC 13124)

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Score

CPF_2371

Hypothetical protein; Identified by glimmer; putative. (149 aa)

Predicted Functional Partners:

rumA-2

0.772

CPF_2375

0.462

selB

0.452

selA

0.452

selD

0.434

Your Current Organism:

Clostridium perfringens ATCC 13124

NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPF_2371	CPF_2375	CPF_2371	CPF_2375	Hypothetical protein; Identified by glimmer; putative.	Putative comE operon protein 1; Identified by similarity to SP:P39694; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	0.462
CPF_2371	rumA-2	CPF_2371	CPF_2370	Hypothetical protein; Identified by glimmer; putative.	23S rRNA (uracil-5-)-methyltransferase RumA; Identified by match to protein family HMM PF05958; match to protein family HMM TIGR00479; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	0.772
CPF_2371	selA	CPF_2371	CPF_2373	Hypothetical protein; Identified by glimmer; putative.	L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.	0.452
CPF_2371	selB	CPF_2371	CPF_2372	Hypothetical protein; Identified by glimmer; putative.	Selenocysteine-specific translation elongation factor; Identified by similarity to SP:P14081; match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF08477; match to protein family HMM PF09106; match to protein family HMM PF09107; match to protein family HMM TIGR00231; match to protein family HMM TIGR00475.	0.452
CPF_2371	selD	CPF_2371	CPF_2374	Hypothetical protein; Identified by glimmer; putative.	Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.	0.434
CPF_2375	CPF_2371	CPF_2375	CPF_2371	Putative comE operon protein 1; Identified by similarity to SP:P39694; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	Hypothetical protein; Identified by glimmer; putative.	0.462
CPF_2375	rumA-2	CPF_2375	CPF_2370	Putative comE operon protein 1; Identified by similarity to SP:P39694; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	23S rRNA (uracil-5-)-methyltransferase RumA; Identified by match to protein family HMM PF05958; match to protein family HMM TIGR00479; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	0.592
CPF_2375	selA	CPF_2375	CPF_2373	Putative comE operon protein 1; Identified by similarity to SP:P39694; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.	0.713
CPF_2375	selB	CPF_2375	CPF_2372	Putative comE operon protein 1; Identified by similarity to SP:P39694; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	Selenocysteine-specific translation elongation factor; Identified by similarity to SP:P14081; match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF08477; match to protein family HMM PF09106; match to protein family HMM PF09107; match to protein family HMM TIGR00231; match to protein family HMM TIGR00475.	0.713
CPF_2375	selD	CPF_2375	CPF_2374	Putative comE operon protein 1; Identified by similarity to SP:P39694; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.	0.733
rumA-2	CPF_2371	CPF_2370	CPF_2371	23S rRNA (uracil-5-)-methyltransferase RumA; Identified by match to protein family HMM PF05958; match to protein family HMM TIGR00479; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	Hypothetical protein; Identified by glimmer; putative.	0.772
rumA-2	CPF_2375	CPF_2370	CPF_2375	23S rRNA (uracil-5-)-methyltransferase RumA; Identified by match to protein family HMM PF05958; match to protein family HMM TIGR00479; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	Putative comE operon protein 1; Identified by similarity to SP:P39694; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	0.592
rumA-2	selA	CPF_2370	CPF_2373	23S rRNA (uracil-5-)-methyltransferase RumA; Identified by match to protein family HMM PF05958; match to protein family HMM TIGR00479; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.	0.410
rumA-2	selB	CPF_2370	CPF_2372	23S rRNA (uracil-5-)-methyltransferase RumA; Identified by match to protein family HMM PF05958; match to protein family HMM TIGR00479; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	Selenocysteine-specific translation elongation factor; Identified by similarity to SP:P14081; match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF08477; match to protein family HMM PF09106; match to protein family HMM PF09107; match to protein family HMM TIGR00231; match to protein family HMM TIGR00475.	0.451
selA	CPF_2371	CPF_2373	CPF_2371	L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.	Hypothetical protein; Identified by glimmer; putative.	0.452
selA	CPF_2375	CPF_2373	CPF_2375	L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.	Putative comE operon protein 1; Identified by similarity to SP:P39694; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	0.713
selA	rumA-2	CPF_2373	CPF_2370	L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.	23S rRNA (uracil-5-)-methyltransferase RumA; Identified by match to protein family HMM PF05958; match to protein family HMM TIGR00479; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.	0.410
selA	selB	CPF_2373	CPF_2372	L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.	Selenocysteine-specific translation elongation factor; Identified by similarity to SP:P14081; match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF08477; match to protein family HMM PF09106; match to protein family HMM PF09107; match to protein family HMM TIGR00231; match to protein family HMM TIGR00475.	0.978
selA	selD	CPF_2373	CPF_2374	L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.	Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.	0.997
selB	CPF_2371	CPF_2372	CPF_2371	Selenocysteine-specific translation elongation factor; Identified by similarity to SP:P14081; match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF08477; match to protein family HMM PF09106; match to protein family HMM PF09107; match to protein family HMM TIGR00231; match to protein family HMM TIGR00475.	Hypothetical protein; Identified by glimmer; putative.	0.452