CPF_2413 protein (Clostridium perfringens ATCC 13124)

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CPF_2413

ABC transporter, substrate-binding protein; Identified by similarity to SP:Q8CWN2; match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family. (298 aa)

Predicted Functional Partners:

CPF_1709

0.995

CPF_1710

0.992

rpsN

0.703

CPF_0043

0.701

CPF_2416

0.682

CPF_0671

0.627

CPF_0044

0.614

rpmB

0.583

CPF_2415

0.583

CPF_2414

0.513

Your Current Organism:

Clostridium perfringens ATCC 13124

NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPF_0043	CPF_0044	CPF_0043	CPF_0044	Identified by match to protein family HMM PF02492.	Conserved hypothetical protein; Identified by similarity to GB:AAO35532.1.	0.846
CPF_0043	CPF_1710	CPF_0043	CPF_1710	Identified by match to protein family HMM PF02492.	Putative zinc ABC transporter, permease protein; Identified by match to protein family HMM PF00950.	0.422
CPF_0043	CPF_2413	CPF_0043	CPF_2413	Identified by match to protein family HMM PF02492.	ABC transporter, substrate-binding protein; Identified by similarity to SP:Q8CWN2; match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.	0.701
CPF_0043	rpmB	CPF_0043	CPF_1987	Identified by match to protein family HMM PF02492.	50S ribosomal protein L28; Identified by similarity to SP:P37807; match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.	0.573
CPF_0043	rpsN	CPF_0043	CPF_2701	Identified by match to protein family HMM PF02492.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.664
CPF_0044	CPF_0043	CPF_0044	CPF_0043	Conserved hypothetical protein; Identified by similarity to GB:AAO35532.1.	Identified by match to protein family HMM PF02492.	0.846
CPF_0044	CPF_2413	CPF_0044	CPF_2413	Conserved hypothetical protein; Identified by similarity to GB:AAO35532.1.	ABC transporter, substrate-binding protein; Identified by similarity to SP:Q8CWN2; match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.	0.614
CPF_0044	rpmB	CPF_0044	CPF_1987	Conserved hypothetical protein; Identified by similarity to GB:AAO35532.1.	50S ribosomal protein L28; Identified by similarity to SP:P37807; match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.	0.573
CPF_0044	rpsN	CPF_0044	CPF_2701	Conserved hypothetical protein; Identified by similarity to GB:AAO35532.1.	30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.647
CPF_0671	CPF_2413	CPF_0671	CPF_2413	Phosphoribosylformylglycinamidine synthase; Identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857.	ABC transporter, substrate-binding protein; Identified by similarity to SP:Q8CWN2; match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.	0.627
CPF_1709	CPF_1710	CPF_1709	CPF_1710	Putative zinc ABC transporter, ATP-binding protein; Identified by similarity to SP:O87862; match to protein family HMM PF00005.	Putative zinc ABC transporter, permease protein; Identified by match to protein family HMM PF00950.	0.999
CPF_1709	CPF_2413	CPF_1709	CPF_2413	Putative zinc ABC transporter, ATP-binding protein; Identified by similarity to SP:O87862; match to protein family HMM PF00005.	ABC transporter, substrate-binding protein; Identified by similarity to SP:Q8CWN2; match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.	0.995
CPF_1710	CPF_0043	CPF_1710	CPF_0043	Putative zinc ABC transporter, permease protein; Identified by match to protein family HMM PF00950.	Identified by match to protein family HMM PF02492.	0.422
CPF_1710	CPF_1709	CPF_1710	CPF_1709	Putative zinc ABC transporter, permease protein; Identified by match to protein family HMM PF00950.	Putative zinc ABC transporter, ATP-binding protein; Identified by similarity to SP:O87862; match to protein family HMM PF00005.	0.999
CPF_1710	CPF_2413	CPF_1710	CPF_2413	Putative zinc ABC transporter, permease protein; Identified by match to protein family HMM PF00950.	ABC transporter, substrate-binding protein; Identified by similarity to SP:Q8CWN2; match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.	0.992
CPF_2413	CPF_0043	CPF_2413	CPF_0043	ABC transporter, substrate-binding protein; Identified by similarity to SP:Q8CWN2; match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.	Identified by match to protein family HMM PF02492.	0.701
CPF_2413	CPF_0044	CPF_2413	CPF_0044	ABC transporter, substrate-binding protein; Identified by similarity to SP:Q8CWN2; match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.	Conserved hypothetical protein; Identified by similarity to GB:AAO35532.1.	0.614
CPF_2413	CPF_0671	CPF_2413	CPF_0671	ABC transporter, substrate-binding protein; Identified by similarity to SP:Q8CWN2; match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.	Phosphoribosylformylglycinamidine synthase; Identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857.	0.627
CPF_2413	CPF_1709	CPF_2413	CPF_1709	ABC transporter, substrate-binding protein; Identified by similarity to SP:Q8CWN2; match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.	Putative zinc ABC transporter, ATP-binding protein; Identified by similarity to SP:O87862; match to protein family HMM PF00005.	0.995
CPF_2413	CPF_1710	CPF_2413	CPF_1710	ABC transporter, substrate-binding protein; Identified by similarity to SP:Q8CWN2; match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.	Putative zinc ABC transporter, permease protein; Identified by match to protein family HMM PF00950.	0.992

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