Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CPF_2490Putative lipoprotein; Identified by similarity to SP:P16055; match to protein family HMM PF04205. (147 aa)    
Predicted Functional Partners:
CPF_2491
ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
   
 0.854
CPF_2488
Conserved hypothetical protein; Identified by similarity to GB:AAO35611.1; match to protein family HMM PF07456.
 
     0.817
CPF_2489
Conserved hypothetical protein; Identified by similarity to GB:CAC98014.1; match to protein family HMM PF07009.
 
 
   0.807
CPF_2361
Putative membrane protein; Identified by similarity to GB:AAO35611.1; match to protein family HMM PF07456.
 
     0.652
gshAB
Glutamate--cysteine ligase/gamma-glutamylcysteine synthetase; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; In the N-terminal section; belongs to the glutamate--cysteine ligase type 1 family. Type 2 subfamily.
  
     0.570
CPF_0746
ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
 
     0.527
CPF_2363
Putative thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
   
 0.523
CPF_0775
Conserved hypothetical protein; Identified by similarity to GB:AAK05345.1; match to protein family HMM PF05043.
  
     0.436
CPF_2362
Conserved hypothetical protein; Identified by similarity to GB:AAM25615.1; match to protein family HMM PF07009.
 
 
   0.419
Your Current Organism:
Clostridium perfringens ATCC 13124
NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124
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