CPF_2546 protein (Clostridium perfringens ATCC 13124)

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CPF_2546

RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family. (239 aa)

Predicted Functional Partners:

xth

0.902

engA

0.684

cmk

0.649

scpB

0.589

CPF_2547

0.559

truB

0.482

CPF_0269

0.478

CPF_0103

0.413

CPF_2104

0.412

CPF_2548

0.400

Your Current Organism:

Clostridium perfringens ATCC 13124

NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPF_0103	CPF_2546	CPF_0103	CPF_2546	Identified by match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231.	RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	0.413
CPF_0103	cmk	CPF_0103	CPF_1340	Identified by match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231.	Cytidylate kinase; Identified by similarity to SP:P38493; match to protein family HMM PF02224; match to protein family HMM TIGR00017.	0.633
CPF_0103	scpB	CPF_0103	CPF_2059	Identified by match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231.	Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	0.549
CPF_0269	CPF_2546	CPF_0269	CPF_2546	Haloacid dehalogenase, IA family protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549.	RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	0.478
CPF_2104	CPF_2546	CPF_2104	CPF_2546	Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	0.412
CPF_2104	engA	CPF_2104	CPF_2008	Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.540
CPF_2546	CPF_0103	CPF_2546	CPF_0103	RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Identified by match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231.	0.413
CPF_2546	CPF_0269	CPF_2546	CPF_0269	RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Haloacid dehalogenase, IA family protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549.	0.478
CPF_2546	CPF_2104	CPF_2546	CPF_2104	RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	0.412
CPF_2546	CPF_2547	CPF_2546	CPF_2547	RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Two component regulator three Y motif protein; Identified by match to protein family HMM PF07495.	0.559
CPF_2546	CPF_2548	CPF_2546	CPF_2548	RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Identified by match to protein family HMM PF02639; Belongs to the UPF0178 family.	0.400
CPF_2546	cmk	CPF_2546	CPF_1340	RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Cytidylate kinase; Identified by similarity to SP:P38493; match to protein family HMM PF02224; match to protein family HMM TIGR00017.	0.649
CPF_2546	engA	CPF_2546	CPF_2008	RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.684
CPF_2546	scpB	CPF_2546	CPF_2059	RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	0.589
CPF_2546	truB	CPF_2546	CPF_1937	RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.482
CPF_2546	xth	CPF_2546	CPF_1377	RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	Exodeoxyribonuclease III; Identified by similarity to SP:P37454; match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633.	0.902
CPF_2547	CPF_2546	CPF_2547	CPF_2546	Two component regulator three Y motif protein; Identified by match to protein family HMM PF07495.	RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	0.559
CPF_2547	CPF_2548	CPF_2547	CPF_2548	Two component regulator three Y motif protein; Identified by match to protein family HMM PF07495.	Identified by match to protein family HMM PF02639; Belongs to the UPF0178 family.	0.559
CPF_2548	CPF_2546	CPF_2548	CPF_2546	Identified by match to protein family HMM PF02639; Belongs to the UPF0178 family.	RNA pseudouridine synthase family protein; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine synthase RsuA family.	0.400
CPF_2548	CPF_2547	CPF_2548	CPF_2547	Identified by match to protein family HMM PF02639; Belongs to the UPF0178 family.	Two component regulator three Y motif protein; Identified by match to protein family HMM PF07495.	0.559

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