CPF_2553 protein (Clostridium perfringens ATCC 13124)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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co-expression

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Score

CPF_2553

ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (304 aa)

Predicted Functional Partners:

CPF_2551

0.999

CPF_2552

0.999

CPF_2554

0.999

CPF_2555

0.999

CPF_1835

0.909

CPF_2538

0.896

pgi

0.481

CPF_0442

0.457

CPF_0118

0.438

CPF_2550

0.433

Your Current Organism:

Clostridium perfringens ATCC 13124

NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPF_0118	CPF_2553	CPF_0118	CPF_2553	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.438
CPF_0442	CPF_2553	CPF_0442	CPF_2553	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.457
CPF_1835	CPF_2538	CPF_1835	CPF_2538	ABC transporter, ATP-binding protein; Identified by similarity to SP:Q8XK20; match to protein family HMM PF00005.	Bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.	0.748
CPF_1835	CPF_2551	CPF_1835	CPF_2551	ABC transporter, ATP-binding protein; Identified by similarity to SP:Q8XK20; match to protein family HMM PF00005.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.641
CPF_1835	CPF_2552	CPF_1835	CPF_2552	ABC transporter, ATP-binding protein; Identified by similarity to SP:Q8XK20; match to protein family HMM PF00005.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.641
CPF_1835	CPF_2553	CPF_1835	CPF_2553	ABC transporter, ATP-binding protein; Identified by similarity to SP:Q8XK20; match to protein family HMM PF00005.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.909
CPF_1835	CPF_2554	CPF_1835	CPF_2554	ABC transporter, ATP-binding protein; Identified by similarity to SP:Q8XK20; match to protein family HMM PF00005.	Oligopeptide/dipeptide ABC transporter, permease protein; Identified by similarity to SP:P42062; match to protein family HMM PF00528.	0.934
CPF_1835	CPF_2555	CPF_1835	CPF_2555	ABC transporter, ATP-binding protein; Identified by similarity to SP:Q8XK20; match to protein family HMM PF00005.	Oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein; Identified by similarity to SP:P42061; match to protein family HMM PF00496.	0.772
CPF_2538	CPF_1835	CPF_2538	CPF_1835	Bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.	ABC transporter, ATP-binding protein; Identified by similarity to SP:Q8XK20; match to protein family HMM PF00005.	0.748
CPF_2538	CPF_2551	CPF_2538	CPF_2551	Bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.846
CPF_2538	CPF_2552	CPF_2538	CPF_2552	Bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.846
CPF_2538	CPF_2553	CPF_2538	CPF_2553	Bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.896
CPF_2538	CPF_2554	CPF_2538	CPF_2554	Bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.	Oligopeptide/dipeptide ABC transporter, permease protein; Identified by similarity to SP:P42062; match to protein family HMM PF00528.	0.978
CPF_2538	CPF_2555	CPF_2538	CPF_2555	Bacterial extracellular solute-binding protein, family 5; Identified by match to protein family HMM PF00496.	Oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein; Identified by similarity to SP:P42061; match to protein family HMM PF00496.	0.484
CPF_2550	CPF_2551	CPF_2550	CPF_2551	Conserved hypothetical protein; Identified by similarity to GB:BAD71068.1.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.449
CPF_2550	CPF_2552	CPF_2550	CPF_2552	Conserved hypothetical protein; Identified by similarity to GB:BAD71068.1.	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	0.447
CPF_2550	CPF_2553	CPF_2550	CPF_2553	Conserved hypothetical protein; Identified by similarity to GB:BAD71068.1.	ABC transporter, permease protein; Identified by match to protein family HMM PF00528.	0.433
CPF_2550	CPF_2554	CPF_2550	CPF_2554	Conserved hypothetical protein; Identified by similarity to GB:BAD71068.1.	Oligopeptide/dipeptide ABC transporter, permease protein; Identified by similarity to SP:P42062; match to protein family HMM PF00528.	0.422
CPF_2550	pgi	CPF_2550	CPF_2549	Conserved hypothetical protein; Identified by similarity to GB:BAD71068.1.	Glucose-6-phosphate isomerase; Identified by match to protein family HMM PF00342; Belongs to the GPI family.	0.695
CPF_2551	CPF_1835	CPF_2551	CPF_1835	Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.	ABC transporter, ATP-binding protein; Identified by similarity to SP:Q8XK20; match to protein family HMM PF00005.	0.641