Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| CPF_2602 | CPF_2603 | Hypothetical protein; Identified by glimmer; putative. | Putative resolvase; Identified by match to protein family HMM PF00239. | 0.773 |
| CPF_2602 | CPF_2604 | Hypothetical protein; Identified by glimmer; putative. | Site-specific recombinase, resolvase family; Identified by similarity to SP:P17867; match to protein family HMM PF00239; match to protein family HMM PF07508. | 0.773 |
| CPF_2602 | CPF_2605 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.576 |
| CPF_2602 | CPF_2606 | Hypothetical protein; Identified by glimmer; putative. | Site-specific recombinase, resolvase family; Identified by match to protein family HMM PF00239; match to protein family HMM PF07508. | 0.557 |
| CPF_2602 | CPF_2608 | Hypothetical protein; Identified by glimmer; putative. | Putative membrane-associated zinc metalloprotease; Identified by match to protein family HMM PF02163. | 0.543 |
| CPF_2603 | CPF_2602 | Putative resolvase; Identified by match to protein family HMM PF00239. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| CPF_2603 | CPF_2604 | Putative resolvase; Identified by match to protein family HMM PF00239. | Site-specific recombinase, resolvase family; Identified by similarity to SP:P17867; match to protein family HMM PF00239; match to protein family HMM PF07508. | 0.856 |
| CPF_2603 | CPF_2605 | Putative resolvase; Identified by match to protein family HMM PF00239. | Hypothetical protein; Identified by glimmer; putative. | 0.576 |
| CPF_2603 | CPF_2606 | Putative resolvase; Identified by match to protein family HMM PF00239. | Site-specific recombinase, resolvase family; Identified by match to protein family HMM PF00239; match to protein family HMM PF07508. | 0.687 |
| CPF_2603 | CPF_2608 | Putative resolvase; Identified by match to protein family HMM PF00239. | Putative membrane-associated zinc metalloprotease; Identified by match to protein family HMM PF02163. | 0.543 |
| CPF_2604 | CPF_2602 | Site-specific recombinase, resolvase family; Identified by similarity to SP:P17867; match to protein family HMM PF00239; match to protein family HMM PF07508. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| CPF_2604 | CPF_2603 | Site-specific recombinase, resolvase family; Identified by similarity to SP:P17867; match to protein family HMM PF00239; match to protein family HMM PF07508. | Putative resolvase; Identified by match to protein family HMM PF00239. | 0.856 |
| CPF_2604 | CPF_2605 | Site-specific recombinase, resolvase family; Identified by similarity to SP:P17867; match to protein family HMM PF00239; match to protein family HMM PF07508. | Hypothetical protein; Identified by glimmer; putative. | 0.576 |
| CPF_2604 | CPF_2606 | Site-specific recombinase, resolvase family; Identified by similarity to SP:P17867; match to protein family HMM PF00239; match to protein family HMM PF07508. | Site-specific recombinase, resolvase family; Identified by match to protein family HMM PF00239; match to protein family HMM PF07508. | 0.688 |
| CPF_2604 | CPF_2608 | Site-specific recombinase, resolvase family; Identified by similarity to SP:P17867; match to protein family HMM PF00239; match to protein family HMM PF07508. | Putative membrane-associated zinc metalloprotease; Identified by match to protein family HMM PF02163. | 0.543 |
| CPF_2605 | CPF_2602 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.576 |
| CPF_2605 | CPF_2603 | Hypothetical protein; Identified by glimmer; putative. | Putative resolvase; Identified by match to protein family HMM PF00239. | 0.576 |
| CPF_2605 | CPF_2604 | Hypothetical protein; Identified by glimmer; putative. | Site-specific recombinase, resolvase family; Identified by similarity to SP:P17867; match to protein family HMM PF00239; match to protein family HMM PF07508. | 0.576 |
| CPF_2605 | CPF_2606 | Hypothetical protein; Identified by glimmer; putative. | Site-specific recombinase, resolvase family; Identified by match to protein family HMM PF00239; match to protein family HMM PF07508. | 0.746 |
| CPF_2605 | CPF_2608 | Hypothetical protein; Identified by glimmer; putative. | Putative membrane-associated zinc metalloprotease; Identified by match to protein family HMM PF02163. | 0.726 |
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