STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bukButyrate kinase; Catalyzes the conversion of butyryl-CoA through butyryl phosphate to butyrate; Belongs to the acetokinase family. (356 aa)    
Predicted Functional Partners:
ptb
Phosphate butyryltransferase; Identified by similarity to SP:Q05624; match to protein family HMM PF01515; match to protein family HMM TIGR02706.
 
 0.999
pta
Phosphate acetyltransferase; Identified by match to protein family HMM PF01515; match to protein family HMM TIGR00651.
 
  
 0.859
nifJ
Pyruvate-flavodoxin oxidoreductase; Identified by similarity to SP:P19543; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
     
 0.738
gdhA
Glutamate dehydrogenase; Identified by similarity to GB:AAN15204.1; match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.593
CPF_2460
acetyl-CoA acetyltransferase; Identified by similarity to SP:P45359; match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.582
CPF_0898
Ethanolamine utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
     
 0.579
CPF_2658
Conserved hypothetical protein; Identified by similarity to PIR:F97278; match to protein family HMM PF01266; match to protein family HMM PF07992.
       0.576
hbd
3-hydroxybutyryl-CoA dehydrogenase; Identified by similarity to SP:P52041; match to protein family HMM PF00725; match to protein family HMM PF02737.
     
 0.575
bcd
butyryl-CoA dehydrogenase; Identified by similarity to SP:P52042; match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.
     
 0.560
crt
3-hydroxybutyryl-CoA dehydratase; Identified by similarity to SP:P52046; match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.557
Your Current Organism:
Clostridium perfringens ATCC 13124
NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.