| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CPF_2106 | CPF_2733 | CPF_2106 | CPF_2733 | S4 domain protein; Identified by match to protein family HMM PF01479. | Conserved hypothetical protein; Identified by similarity to GB:AAO37069.1; match to protein family HMM PF05991. | 0.620 |
| CPF_2106 | fbpA | CPF_2106 | CPF_2101 | S4 domain protein; Identified by match to protein family HMM PF01479. | Fibronectin-binding protein; Identified by similarity to GB:AAM73699.1; match to protein family HMM PF05670; match to protein family HMM PF05833. | 0.869 |
| CPF_2106 | mrnC | CPF_2106 | CPF_2736 | S4 domain protein; Identified by match to protein family HMM PF01479. | Conserved hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.768 |
| CPF_2106 | rplC | CPF_2106 | CPF_2714 | S4 domain protein; Identified by match to protein family HMM PF01479. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.704 |
| CPF_2106 | rpmG | CPF_2106 | CPF_2729 | S4 domain protein; Identified by match to protein family HMM PF01479. | 50S ribosomal protein L33; Identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; Belongs to the bacterial ribosomal protein bL33 family. | 0.756 |
| CPF_2733 | CPF_2106 | CPF_2733 | CPF_2106 | Conserved hypothetical protein; Identified by similarity to GB:AAO37069.1; match to protein family HMM PF05991. | S4 domain protein; Identified by match to protein family HMM PF01479. | 0.620 |
| CPF_2733 | CPF_2734 | CPF_2733 | CPF_2734 | Conserved hypothetical protein; Identified by similarity to GB:AAO37069.1; match to protein family HMM PF05991. | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.951 |
| CPF_2733 | cysS | CPF_2733 | CPF_2737 | Conserved hypothetical protein; Identified by similarity to GB:AAO37069.1; match to protein family HMM PF05991. | cysteinyl-tRNA synthetase; Identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.772 |
| CPF_2733 | mrnC | CPF_2733 | CPF_2736 | Conserved hypothetical protein; Identified by similarity to GB:AAO37069.1; match to protein family HMM PF05991. | Conserved hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.940 |
| CPF_2733 | sigH | CPF_2733 | CPF_2732 | Conserved hypothetical protein; Identified by similarity to GB:AAO37069.1; match to protein family HMM PF05991. | RNA polymerase sigma-H factor; Identified by similarity to SP:P17869; match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02859; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. | 0.821 |
| CPF_2733 | thyX | CPF_2733 | CPF_2735 | Conserved hypothetical protein; Identified by similarity to GB:AAO37069.1; match to protein family HMM PF05991. | Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.767 |
| CPF_2734 | CPF_2733 | CPF_2734 | CPF_2733 | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Conserved hypothetical protein; Identified by similarity to GB:AAO37069.1; match to protein family HMM PF05991. | 0.951 |
| CPF_2734 | cysS | CPF_2734 | CPF_2737 | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | cysteinyl-tRNA synthetase; Identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.863 |
| CPF_2734 | mrnC | CPF_2734 | CPF_2736 | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Conserved hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.940 |
| CPF_2734 | rplC | CPF_2734 | CPF_2714 | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.690 |
| CPF_2734 | rpmG | CPF_2734 | CPF_2729 | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 50S ribosomal protein L33; Identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; Belongs to the bacterial ribosomal protein bL33 family. | 0.635 |
| CPF_2734 | sigH | CPF_2734 | CPF_2732 | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | RNA polymerase sigma-H factor; Identified by similarity to SP:P17869; match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02859; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family. | 0.738 |
| CPF_2734 | thyX | CPF_2734 | CPF_2735 | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.797 |
| cysS | CPF_2733 | CPF_2737 | CPF_2733 | cysteinyl-tRNA synthetase; Identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA synthetase family. | Conserved hypothetical protein; Identified by similarity to GB:AAO37069.1; match to protein family HMM PF05991. | 0.772 |
| cysS | CPF_2734 | CPF_2737 | CPF_2734 | cysteinyl-tRNA synthetase; Identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA synthetase family. | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.863 |
