Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
CPF_2873Conserved hypothetical protein; Identified by similarity to PIR:B97063; match to protein family HMM PF07892. (115 aa)    
Predicted Functional Partners:
CPF_2874
Oxidoreductase, pyridine nucleotide-disulphide family; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.
 
    0.982
CPF_2875
FAD-dependent oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF04324.
 
    0.963
CPF_2499
Oxidoreductase, pyridine nucleotide-disulphide family; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.
 
    0.926
glpP
Glycerol uptake operon antiterminator; Identified by similarity to SP:P30300; match to protein family HMM PF04309.
 
    0.874
CPF_0411
Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266; match to protein family HMM PF04324.
 
    0.856
CPF_0012
FAD-dependent oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF04324.
 
    0.833
CPF_0412
Pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF07992.
 
    0.791
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
       0.607
glpF
Glycerol uptake facilitator protein; Identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.410
Your Current Organism:
Clostridium perfringens ATCC 13124
NCBI taxonomy Id: 195103
Other names: C. perfringens ATCC 13124, Clostridium perfringens str. ATCC 13124, Clostridium perfringens strain ATCC 13124
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