STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332275_00521Unannotated protein. (181 aa)    
Predicted Functional Partners:
GCA_000332275_03684
Unannotated protein.
   
   0.925
GCA_000332275_01685
Unannotated protein.
   
   0.906
GCA_000332275_01834
Unannotated protein.
    
 
 0.809
GCA_000332275_03397
Unannotated protein.
    
 
 0.809
GCA_000332275_03133
Unannotated protein.
   
    0.776
GCA_000332275_00522
Unannotated protein.
       0.528
GCA_000332275_01696
Unannotated protein.
   
    0.509
GCA_000332275_01695
Unannotated protein.
   
  
 0.482
GCA_000332275_03490
Unannotated protein.
  
  
 0.441
GCA_000332275_00340
Unannotated protein.
 
    0.439
Your Current Organism:
Synechococcus sp. PCC7336
NCBI taxonomy Id: 195250
Other names: Brevicoccus berkleyi PCC 7336, S. sp. PCC 7336, Synechococcus sp. PCC 7336
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.