STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY59356.1Hypothetical protein. (109 aa)    
Predicted Functional Partners:
AFY62156.1
Hypothetical protein.
  
     0.757
AFY62074.1
Putative Zn-dependent protease; PFAM: Matrixin.
  
     0.755
AFY61423.1
Hypothetical protein.
  
     0.749
AFY60624.1
PFAM: Protein of unknown function (DUF3153).
  
     0.748
AFY62182.1
PFAM: Dihaem cytochrome c.
  
     0.745
AFY62449.1
PFAM: Ycf66 protein N-terminus.
  
     0.743
AFY60992.1
Hypothetical protein.
  
     0.742
AFY59750.1
Hypothetical protein.
  
     0.740
AFY60555.1
Hypothetical protein.
  
     0.717
AFY59630.1
Hypothetical protein.
  
     0.704
Your Current Organism:
Synechococcus sp. PCC6312
NCBI taxonomy Id: 195253
Other names: S. sp. PCC 6312, Synechococcus sp. ATCC 27167, Synechococcus sp. PCC 6312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.