STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY59702.1Hypothetical protein. (391 aa)    
Predicted Functional Partners:
AFY59707.1
Hypothetical protein.
 
     0.788
AFY59571.1
PFAM: Protein of unknown function DUF58.
 
     0.773
AFY62256.1
Putative membrane protein/domain protein; PFAM: RDD family.
 
     0.765
AFY59535.1
PFAM: Integral membrane protein DUF95.
  
     0.759
AFY61514.1
Hypothetical protein.
  
     0.747
AFY59787.1
Hypothetical protein.
  
     0.721
AFY60061.1
Negative regulator of beta-lactamase expression; PFAM: N-acetylmuramoyl-L-alanine amidase.
  
     0.686
AFY59313.1
Negative regulator of beta-lactamase expression; PFAM: N-acetylmuramoyl-L-alanine amidase.
  
     0.669
AFY62018.1
PFAM: Protein of unknown function (DUF1232).
  
     0.650
AFY62594.1
Hypothetical protein.
  
     0.641
Your Current Organism:
Synechococcus sp. PCC6312
NCBI taxonomy Id: 195253
Other names: S. sp. PCC 6312, Synechococcus sp. ATCC 27167, Synechococcus sp. PCC 6312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.