STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY61000.1PFAM: Protein of unknown function (DUF2887); TIGRFAM: conserved hypothetical protein (putative transposase or invertase). (284 aa)    
Predicted Functional Partners:
AFY59983.1
Hypothetical protein.
  
     0.739
AFY62726.1
TIGRFAM: conserved hypothetical protein (putative transposase or invertase).
  
     0.672
AFY59321.1
Calx-beta domain-containing protein,FG-GAP repeat protein; PFAM: Calx-beta domain; FG-GAP repeat.
  
     0.615
AFY62053.1
Hypothetical protein.
  
     0.574
AFY61001.1
Putative membrane protein; PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain.
       0.559
AFY60727.1
Hypothetical protein.
  
     0.549
AFY61540.1
Hypothetical protein.
  
     0.538
lipA
Lipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
       0.523
AFY61389.1
Hypothetical protein.
  
     0.502
AFY59483.1
Hypothetical protein.
  
     0.476
Your Current Organism:
Synechococcus sp. PCC6312
NCBI taxonomy Id: 195253
Other names: S. sp. PCC 6312, Synechococcus sp. ATCC 27167, Synechococcus sp. PCC 6312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.