STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY61011.1PFAM: Protein of unknown function (DUF1257). (128 aa)    
Predicted Functional Partners:
AFY61012.1
Ferredoxin.
 
     0.888
AFY61010.1
PFAM: Protein of unknown function (DUF2997).
 
  
 0.883
AFY60210.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
   
 0.766
AFY61685.1
Putative protein; PFAM: Hypothetical chloroplast protein Ycf34.
  
     0.705
AFY62480.1
Hypothetical protein.
  
     0.705
rpmF
PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
  
     0.704
AFY59579.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
   
 0.675
AFY62529.1
Molecular chaperone; PFAM: Hsp70 protein; Belongs to the heat shock protein 70 family.
  
     0.666
AFY60496.1
Hypothetical protein.
  
     0.659
AFY59591.1
Hypothetical protein.
  
     0.636
Your Current Organism:
Synechococcus sp. PCC6312
NCBI taxonomy Id: 195253
Other names: S. sp. PCC 6312, Synechococcus sp. ATCC 27167, Synechococcus sp. PCC 6312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.