STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY61416.1Putative nucleic acid-binding protein, contains PIN domain. (117 aa)    
Predicted Functional Partners:
AFY59277.1
Virulence-associated protein.
  
 
 0.743
AFY61417.1
Hypothetical protein.
       0.560
AFY61216.1
PFAM: Protein of unknown function (DUF820).
  
     0.539
AFY59640.1
PFAM: Protein of unknown function (DUF820).
  
     0.499
AFY60409.1
Hypothetical protein.
  
     0.497
AFY59559.1
PFAM: Protein of unknown function (DUF820).
  
     0.483
AFY61935.1
PFAM: CRISPR-associated protein; TIGRFAM: CRISPR-associated protein Cas10/Cmr2, subtype III-B.
  
     0.483
AFY61776.1
Hypothetical protein; Manually curated.
  
     0.461
AFY60669.1
Hypothetical protein.
  
     0.456
AFY59621.1
PFAM: Protein of unknown function (DUF820).
  
     0.451
Your Current Organism:
Synechococcus sp. PCC6312
NCBI taxonomy Id: 195253
Other names: S. sp. PCC 6312, Synechococcus sp. ATCC 27167, Synechococcus sp. PCC 6312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.