STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY61659.1PFAM: Protein of unknown function (DUF3122). (156 aa)    
Predicted Functional Partners:
AFY59512.1
KaiA domain protein; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC hexamer pho [...]
  
     0.709
AFY61660.1
Site-specific DNA methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase.
       0.634
AFY61661.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
       0.634
AFY61662.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter.
       0.634
AFY61676.1
PFAM: Photosystem I reaction centre subunit VIII; TIGRFAM: photosystem I reaction center subunit VIII.
  
     0.618
AFY61991.1
Hypothetical protein.
  
     0.606
AFY60861.1
Protein of unknown function DUF83.
  
     0.601
AFY61369.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region.
  
     0.523
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
       0.520
AFY62021.1
PFAM: Subtilase family.
  
     0.518
Your Current Organism:
Synechococcus sp. PCC6312
NCBI taxonomy Id: 195253
Other names: S. sp. PCC 6312, Synechococcus sp. ATCC 27167, Synechococcus sp. PCC 6312
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