STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY62006.1PFAM: Protein of unknown function (DUF3119). (138 aa)    
Predicted Functional Partners:
AFY62005.1
PFAM: Protein of unknown function (DUF3086).
 
     0.872
AFY60598.1
PFAM: Protein of unknown function (DUF3067); manually curated.
  
     0.769
AFY62352.1
PFAM: Protein of unknown function (DUF760).
  
     0.764
AFY59515.1
PFAM: Protein of unknown function (DUF2930).
  
     0.762
AFY62771.1
Hypothetical protein.
  
     0.760
thf1
Photosystem II biogenesis protein Psp29; May be involved in photosynthetic membrane biogenesis.
  
     0.758
AFY62456.1
PFAM: Protein of unknown function (DUF1997).
  
     0.758
AFY60949.1
PFAM: Protein of unknown function (DUF3464).
  
     0.756
AFY59396.1
PsbP; PFAM: PsbP.
  
     0.751
AFY60994.1
Hypothetical protein.
  
     0.749
Your Current Organism:
Synechococcus sp. PCC6312
NCBI taxonomy Id: 195253
Other names: S. sp. PCC 6312, Synechococcus sp. ATCC 27167, Synechococcus sp. PCC 6312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.