STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY62255.1PFAM: Predicted periplasmic protein (DUF2092). (308 aa)    
Predicted Functional Partners:
AFY60583.1
Hypothetical protein.
 
     0.774
AFY62256.1
Putative membrane protein/domain protein; PFAM: RDD family.
       0.746
AFY61672.1
PFAM: Ion channel.
  
     0.737
AFY61374.1
Arylsulfatase regulator (Fe-S oxidoreductase); PFAM: Radical SAM superfamily.
  
     0.599
AFY61523.1
Arylsulfatase regulator (Fe-S oxidoreductase); PFAM: Radical SAM superfamily.
  
     0.562
AFY62029.1
Sodium--glutamate symport carrier GltS; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.
  
     0.513
AFY62254.1
PFAM: Mo-dependent nitrogenase C-terminus.
       0.472
pcxA-2
CemA family; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport; Belongs to the CemA family.
  
     0.462
AFY59308.1
TIGRFAM: conserved hypothetical protein (putative transposase or invertase).
  
     0.411
Your Current Organism:
Synechococcus sp. PCC6312
NCBI taxonomy Id: 195253
Other names: S. sp. PCC 6312, Synechococcus sp. ATCC 27167, Synechococcus sp. PCC 6312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.