STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPW99920.1Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)    
Predicted Functional Partners:
B1A75_12365
Glycosyl transferase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.981
OPW99919.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.979
OPX02419.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.975
OPX02831.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.909
B1A75_12990
Diguanylate cyclase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.905
OPX01187.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.904
OPX03257.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.898
OPX03197.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.898
OPX00608.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.898
OPX03019.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.893
Your Current Organism:
Geobacillus sp. LEMMY01
NCBI taxonomy Id: 1954237
Other names: G. sp. LEMMY01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.