STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0675_38310Regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)    
Predicted Functional Partners:
OQQ19732.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.878
OQQ13716.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.774
OQQ20631.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.771
OQQ14880.1
Sarcosine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.
     
 0.705
gcvP
Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.677
OQQ19923.1
Ubiquinone biosynthesis methyltransferase UbiE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.570
menG
Bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
  
  
 
0.567
OQQ13640.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.565
OQQ13702.1
Acyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.559
OQQ13705.1
Modular polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.558
Your Current Organism:
Streptomyces sp. M41
NCBI taxonomy Id: 1955065
Other names: S. sp. M41(2017), Streptomyces sp. M41(2017)
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