Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BD01_0075 | BD01_0076 | Hypothetical protein. | Glycerophosphoryl diester phosphodiesterase; COG0584. | 0.649 |
BD01_0075 | BD01_0077 | Hypothetical protein. | Glycerophosphoryl diester phosphodiesterase; COG0584. | 0.649 |
BD01_0075 | BD01_0078 | Hypothetical protein. | Permeases of the major facilitator superfamily; COG0477. | 0.467 |
BD01_0075 | BD01_0079 | Hypothetical protein. | Permeases of the major facilitator superfamily; COG0477. | 0.448 |
BD01_0076 | BD01_0075 | Glycerophosphoryl diester phosphodiesterase; COG0584. | Hypothetical protein. | 0.649 |
BD01_0076 | BD01_0077 | Glycerophosphoryl diester phosphodiesterase; COG0584. | Glycerophosphoryl diester phosphodiesterase; COG0584. | 0.984 |
BD01_0076 | BD01_0078 | Glycerophosphoryl diester phosphodiesterase; COG0584. | Permeases of the major facilitator superfamily; COG0477. | 0.804 |
BD01_0076 | BD01_0079 | Glycerophosphoryl diester phosphodiesterase; COG0584. | Permeases of the major facilitator superfamily; COG0477. | 0.686 |
BD01_0076 | BD01_0080 | Glycerophosphoryl diester phosphodiesterase; COG0584. | Putative nucleotidyltransferase; COG1669. | 0.449 |
BD01_0076 | BD01_0081 | Glycerophosphoryl diester phosphodiesterase; COG0584. | Hypothetical protein; COG2361. | 0.449 |
BD01_0076 | BD01_0082 | Glycerophosphoryl diester phosphodiesterase; COG0584. | Hydrolase of the alpha/beta superfamily; COG1073. | 0.713 |
BD01_0076 | BD01_0083 | Glycerophosphoryl diester phosphodiesterase; COG0584. | Putative deacetylase; COG3233. | 0.404 |
BD01_0077 | BD01_0075 | Glycerophosphoryl diester phosphodiesterase; COG0584. | Hypothetical protein. | 0.649 |
BD01_0077 | BD01_0076 | Glycerophosphoryl diester phosphodiesterase; COG0584. | Glycerophosphoryl diester phosphodiesterase; COG0584. | 0.984 |
BD01_0077 | BD01_0078 | Glycerophosphoryl diester phosphodiesterase; COG0584. | Permeases of the major facilitator superfamily; COG0477. | 0.802 |
BD01_0077 | BD01_0079 | Glycerophosphoryl diester phosphodiesterase; COG0584. | Permeases of the major facilitator superfamily; COG0477. | 0.733 |
BD01_0077 | BD01_0080 | Glycerophosphoryl diester phosphodiesterase; COG0584. | Putative nucleotidyltransferase; COG1669. | 0.449 |
BD01_0077 | BD01_0081 | Glycerophosphoryl diester phosphodiesterase; COG0584. | Hypothetical protein; COG2361. | 0.449 |
BD01_0077 | BD01_0082 | Glycerophosphoryl diester phosphodiesterase; COG0584. | Hydrolase of the alpha/beta superfamily; COG1073. | 0.733 |
BD01_0077 | BD01_0083 | Glycerophosphoryl diester phosphodiesterase; COG0584. | Putative deacetylase; COG3233. | 0.404 |
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