STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD01_0136ATPases involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (241 aa)    
Predicted Functional Partners:
hypA
Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 
 0.941
BD01_0133
Ni,Fe-hydrogenase maturation factor; COG0680.
 
     0.714
BD01_0138
Co/Zn/Cd efflux system component; COG1230.
  
  
 0.619
BD01_0390
NADH:ubiquinone oxidoreductase 27 kD subunit; COG0852.
    
 0.616
BD01_0389
NADH:ubiquinone oxidoreductase 49 kD subunit 7; COG0649; Belongs to the complex I 49 kDa subunit family.
     
 0.614
BD01_2064
NADH:ubiquinone oxidoreductase 24 kD subunit; COG1905.
    
 0.602
BD01_2063
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit; COG1894.
    
 0.593
BD01_0391
NADH:ubiquinone oxidoreductase 20 kD subunit-related Fe-S oxidoreductase; COG0377; Belongs to the complex I 20 kDa subunit family.
   
 
 0.548
BD01_0134
Putative nucleic acid-binding protein, contains PIN domain; COG1569.
       0.534
BD01_0135
Hypothetical protein.
       0.526
Your Current Organism:
Thermococcus nautili
NCBI taxonomy Id: 195522
Other names: CNCM 4275, JCM 19601, T. nautili, Thermococcus nautili Gorlas et al. 2014, Thermococcus nautilus, Thermococcus sp. 30-1, strain 30-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.