STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD01_0469Putative pyrophosphatase; COG1694. (100 aa)    
Predicted Functional Partners:
BD01_0468
Putative transcriptional regulators; COG0640.
  
  
 0.859
BD01_0467
Putative metal-dependent protease of the PAD1/JAB1 superfamily; COG1310.
       0.711
BD01_0470
Transcriptional regulators; COG1522.
 
     0.673
BD01_0466
Putative translation initiation inhibitor, yjgF family; COG0251.
       0.607
BD01_0465
Hypothetical protein.
       0.498
BD01_0471
Putative membrane protein; COG1836.
       0.479
Your Current Organism:
Thermococcus nautili
NCBI taxonomy Id: 195522
Other names: CNCM 4275, JCM 19601, T. nautili, Thermococcus nautili Gorlas et al. 2014, Thermococcus nautilus, Thermococcus sp. 30-1, strain 30-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.