rpl37e protein (Thermococcus nautili) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

rpl37e

Ribosomal protein L37E (rpl37E); Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family. (62 aa)

Predicted Functional Partners:

rpl29

0.970

rpl30e

0.966

BD01_0747

0.965

rpl14e

0.965

rpl24e

0.964

rpl22

0.964

rpl32e

0.962

rpl31e

0.960

rpl24

0.960

rpl44e

0.959

Your Current Organism:

Thermococcus nautili

NCBI taxonomy Id: 195522
Other names: CNCM 4275, JCM 19601, T. nautili, Thermococcus nautili Gorlas et al. 2014, Thermococcus nautilus, Thermococcus sp. 30-1, strain 30-1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BD01_0747	rpl22	BD01_0747	BD01_2153	Small nuclear ribonucleoprotein (snRNP-like protein); COG1958; Belongs to the snRNP Sm proteins family.	Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.426
BD01_0747	rpl29	BD01_0747	BD01_2155	Small nuclear ribonucleoprotein (snRNP-like protein); COG1958; Belongs to the snRNP Sm proteins family.	Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.694
BD01_0747	rpl30e	BD01_0747	BD01_0190	Small nuclear ribonucleoprotein (snRNP-like protein); COG1958; Belongs to the snRNP Sm proteins family.	Ribosomal protein L30E (rpl30E); Belongs to the eukaryotic ribosomal protein eL30 family.	0.761
BD01_0747	rpl31e	BD01_0747	BD01_0847	Small nuclear ribonucleoprotein (snRNP-like protein); COG1958; Belongs to the snRNP Sm proteins family.	Ribosomal protein L31E (rpl31E); Belongs to the ribosomal protein L31e family.	0.520
BD01_0747	rpl37e	BD01_0747	BD01_0746	Small nuclear ribonucleoprotein (snRNP-like protein); COG1958; Belongs to the snRNP Sm proteins family.	Ribosomal protein L37E (rpl37E); Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family.	0.965
rpl14e	rpl22	BD01_2177	BD01_2153	Ribosomal protein L14E (rpl14E); Belongs to the eukaryotic ribosomal protein eL14 family.	Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.999
rpl14e	rpl24	BD01_2177	BD01_2160	Ribosomal protein L14E (rpl14E); Belongs to the eukaryotic ribosomal protein eL14 family.	Ribosomal protein L24P; Located at the polypeptide exit tunnel on the outside of the subunit.	0.999
rpl14e	rpl24e	BD01_2177	BD01_0615	Ribosomal protein L14E (rpl14E); Belongs to the eukaryotic ribosomal protein eL14 family.	Ribosomal protein L24e; Binds to the 23S rRNA.	0.999
rpl14e	rpl29	BD01_2177	BD01_2155	Ribosomal protein L14E (rpl14E); Belongs to the eukaryotic ribosomal protein eL14 family.	Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.999
rpl14e	rpl30e	BD01_2177	BD01_0190	Ribosomal protein L14E (rpl14E); Belongs to the eukaryotic ribosomal protein eL14 family.	Ribosomal protein L30E (rpl30E); Belongs to the eukaryotic ribosomal protein eL30 family.	0.999
rpl14e	rpl31e	BD01_2177	BD01_0847	Ribosomal protein L14E (rpl14E); Belongs to the eukaryotic ribosomal protein eL14 family.	Ribosomal protein L31E (rpl31E); Belongs to the ribosomal protein L31e family.	0.999
rpl14e	rpl32e	BD01_2177	BD01_2166	Ribosomal protein L14E (rpl14E); Belongs to the eukaryotic ribosomal protein eL14 family.	Ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	0.999
rpl14e	rpl37e	BD01_2177	BD01_0746	Ribosomal protein L14E (rpl14E); Belongs to the eukaryotic ribosomal protein eL14 family.	Ribosomal protein L37E (rpl37E); Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family.	0.965
rpl14e	rpl44e	BD01_2177	BD01_0173	Ribosomal protein L14E (rpl14E); Belongs to the eukaryotic ribosomal protein eL14 family.	Ribosomal protein L44; Binds to the 23S rRNA.	0.999
rpl22	BD01_0747	BD01_2153	BD01_0747	Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	Small nuclear ribonucleoprotein (snRNP-like protein); COG1958; Belongs to the snRNP Sm proteins family.	0.426
rpl22	rpl14e	BD01_2153	BD01_2177	Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	Ribosomal protein L14E (rpl14E); Belongs to the eukaryotic ribosomal protein eL14 family.	0.999
rpl22	rpl24	BD01_2153	BD01_2160	Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	Ribosomal protein L24P; Located at the polypeptide exit tunnel on the outside of the subunit.	0.999
rpl22	rpl24e	BD01_2153	BD01_0615	Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	Ribosomal protein L24e; Binds to the 23S rRNA.	0.999
rpl22	rpl29	BD01_2153	BD01_2155	Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.999
rpl22	rpl30e	BD01_2153	BD01_0190	Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	Ribosomal protein L30E (rpl30E); Belongs to the eukaryotic ribosomal protein eL30 family.	0.999

page 1 of 5

Server load: medium (46%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About