STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD01_0803Hypothetical protein; COG1430. (126 aa)    
Predicted Functional Partners:
pfdA
Putative prefoldin, molecular chaperone implicated in de novo protein folding; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding.
       0.553
BD01_2046
COG1599.
  
     0.530
secD
Preprotein translocase subunit SecD; Involved in protein export.
 
     0.519
rpl34e
Ribosomal protein L34E (rpl34E); Belongs to the eukaryotic ribosomal protein eL34 family.
  
     0.515
BD01_0205
Hypothetical protein.
  
     0.496
BD01_1783
Flp pilus assembly protein TadC; COG2064.
 
     0.488
BD01_0801
Prefoldin beta subunit (PfdB).
       0.487
BD01_0233
Transcription elongation factor; COG0195.
 
     0.482
BD01_1784
Flp pilus assembly protein TadC; COG2064.
 
     0.473
BD01_0254
Putative RNA-binding protein containing a C-terminal EMAP domain; COG2517.
  
     0.464
Your Current Organism:
Thermococcus nautili
NCBI taxonomy Id: 195522
Other names: CNCM 4275, JCM 19601, T. nautili, Thermococcus nautili Gorlas et al. 2014, Thermococcus nautilus, Thermococcus sp. 30-1, strain 30-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.