STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD01_0844Na+/H+-dicarboxylate symporters; COG1301. (428 aa)    
Predicted Functional Partners:
BD01_0843
Biotin-(acetyl-CoA carboxylase) ligase; COG0340.
 
   
 0.706
BD01_0840
Carbon starvation protein, predicted membrane protein; COG1966.
 
  
 0.642
BD01_0845
Hypothetical protein.
       0.630
BD01_0634
Amino acid permease; COG0814.
   
 
 0.581
BD01_0842
DhnA-type fructose-1,6-bisphosphate aldolase-related enzyme; COG1830.
       0.569
BD01_2262
Na+-dependent transporters of the SNF family; COG0733.
 
  
 0.532
BD01_0877
NAD-dependent aldehyde dehydrogenase; COG1012; Belongs to the aldehyde dehydrogenase family.
 
  
 0.504
BD01_1533
Na+/proline symporter; COG0591; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.456
BD01_1707
Na+/proline symporter; COG0591; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.456
BD01_0841
Pyruvate/oxaloacetate carboxyltransferase; COG5016.
     
 0.421
Your Current Organism:
Thermococcus nautili
NCBI taxonomy Id: 195522
Other names: CNCM 4275, JCM 19601, T. nautili, Thermococcus nautili Gorlas et al. 2014, Thermococcus nautilus, Thermococcus sp. 30-1, strain 30-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.