STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD01_1005ABC-type transport system involved in multi-copper enzyme maturation, permease component; COG1277. (309 aa)    
Predicted Functional Partners:
BD01_1006
Putative membrane protein; COG1470.
 
    0.948
BD01_1007
ABC transporter ATP-binding protein.
 
 
 0.933
BD01_0319
ABC-type multidrug transport system, ATPase component; COG1131.
 
 
 0.678
moaC
Molybdenum cofactor biosynthesis enzyme; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
     
 0.620
BD01_1122
ABC-type multidrug transport system, ATPase component; COG1131.
  
 
 0.603
BD01_1074
ABC-type multidrug transport system, ATPase component; COG1131.
  
 
 0.599
BD01_0162
ABC transporter ATP-binding protein.
  
 
 0.586
BD01_0936
Ribosomal protein S16.
  
 
 0.586
BD01_1296
Ribosomal protein S16.
  
 
 0.586
BD01_1308
ABC transporter ATP-binding protein.
  
 
 0.586
Your Current Organism:
Thermococcus nautili
NCBI taxonomy Id: 195522
Other names: CNCM 4275, JCM 19601, T. nautili, Thermococcus nautili Gorlas et al. 2014, Thermococcus nautilus, Thermococcus sp. 30-1, strain 30-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.