STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD01_1233Threonine synthase; COG0498. (376 aa)    
Predicted Functional Partners:
BD01_2223
Threonine synthase; COG0498.
  
  
 
0.913
BD01_1642
Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
  
  
 
0.912
BD01_0310
Threonine dehydrogenase-related Zn-dependent dehydrogenase; COG1063.
   
 
 0.906
BD01_2086
Homoserine dehydrogenase; COG0460.
 
 
 0.861
BD01_1232
Hypothetical protein; COG3885.
       0.819
BD01_1234
Hypothetical protein.
       0.819
psmB
20S proteasome, alpha and beta subunits; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
     
 0.727
BD01_1231
Hypothetical protein.
       0.658
vapC-7
Putative nucleic acid-binding protein, contains PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
       0.646
BD01_1236
Ribosomal protein S16.
       0.606
Your Current Organism:
Thermococcus nautili
NCBI taxonomy Id: 195522
Other names: CNCM 4275, JCM 19601, T. nautili, Thermococcus nautili Gorlas et al. 2014, Thermococcus nautilus, Thermococcus sp. 30-1, strain 30-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.