STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD01_1359CBS domain protein; COG0517. (179 aa)    
Predicted Functional Partners:
BD01_1360
Kef-type K+ transport systems, membrane components; COG0475.
     
 0.817
BD01_1358
Putative FAD-dependent dehydrogenase; COG2509.
       0.665
BD01_1362
Transposase; COG3677.
       0.513
BD01_1361
Hypothetical protein.
       0.503
BD01_2085
CBS domain protein; COG0517.
 
    0.482
BD01_0557
Putative GTPase, probable translation factor; COG0012.
 
  
 0.423
BD01_1357
Hypothetical protein.
       0.411
BD01_1355
Putative ATPase of the PP-loop superfamily implicated in cell cycle control; COG0037.
     
 0.404
BD01_1356
Hypothetical protein.
       0.401
Your Current Organism:
Thermococcus nautili
NCBI taxonomy Id: 195522
Other names: CNCM 4275, JCM 19601, T. nautili, Thermococcus nautili Gorlas et al. 2014, Thermococcus nautilus, Thermococcus sp. 30-1, strain 30-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.