STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD01_1533Na+/proline symporter; COG0591; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (538 aa)    
Predicted Functional Partners:
BD01_1532
Hypothetical protein.
       0.819
BD01_0877
NAD-dependent aldehyde dehydrogenase; COG1012; Belongs to the aldehyde dehydrogenase family.
  
  
 0.695
BD01_0840
Carbon starvation protein, predicted membrane protein; COG1966.
 
    0.681
BD01_1531
Hypothetical protein.
       0.646
BD01_1535
Glycine/D-amino acid oxidases (deaminating); COG0665.
  
  
 0.627
BD01_0110
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; COG0365.
  
  
 0.615
BD01_1534
Putative NAD(FAD)-dependent dehydrogenase; COG0446.
     
 0.609
BD01_2208
Adenine/guanine phosphoribosyltransferase-related PRPP-binding protein; COG0503.
   
  
 0.593
BD01_1579
Na+/H+ antiporter; COG1757.
 
  
 0.567
BD01_1536
Permeases of the major facilitator superfamily; COG0477.
 
  
 0.563
Your Current Organism:
Thermococcus nautili
NCBI taxonomy Id: 195522
Other names: CNCM 4275, JCM 19601, T. nautili, Thermococcus nautili Gorlas et al. 2014, Thermococcus nautilus, Thermococcus sp. 30-1, strain 30-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.