STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD01_1573Putative archaeal kinase (sugar kinase superfamily); COG1829. (300 aa)    
Predicted Functional Partners:
BD01_1978
Uncharacterized protein conserved in archaea; COG1701.
 
  
 0.985
BD01_1928
Ketopantoate reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
 
  
 0.946
BD01_0542
Phosphopantothenoylcysteine synthetase/decarboxylase; COG0452.
 
   
 0.682
BD01_1574
Hypothetical protein.
       0.648
BD01_1575
Ribosomal protein S16.
       0.648
BD01_1576
Hypothetical protein.
       0.648
BD01_1577
Putative Fe-S oxidoreductase; COG0535.
       0.648
alaS
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
    0.634
htpX
Zn-dependent protease with chaperone function; COG0501; Belongs to the peptidase M48B family.
  
    0.632
BD01_1285
Zn-dependent protease with chaperone function; COG0501.
  
    0.632
Your Current Organism:
Thermococcus nautili
NCBI taxonomy Id: 195522
Other names: CNCM 4275, JCM 19601, T. nautili, Thermococcus nautili Gorlas et al. 2014, Thermococcus nautilus, Thermococcus sp. 30-1, strain 30-1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.