STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD01_1589Hypothetical protein. (349 aa)    
Predicted Functional Partners:
rnp4
RNase P subunit RPR2; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
 
     0.631
BD01_0960
Putative membrane protein, required for N-linked glycosylation; COG1287.
  
     0.623
BD01_0205
Hypothetical protein.
  
     0.602
BD01_0992
Putative ATPase (AAA+ superfamily); COG1672.
  
     0.586
BD01_1591
Putative ATPase involved in replication control, Cdc46/Mcm family; COG1241.
       0.561
BD01_0103
Kef-type K+ transport systems, predicted NAD-binding component; COG1226.
  
     0.550
BD01_1146
Putative archaeal flagellar protein D/E; COG3351.
 
     0.539
glkA
Archaeal ADP-dependent phosphofructokinase/glucokinase; Catalyzes the phosphorylation of D-glucose to D-glucose 6- phosphate using ADP as the phosphate donor.
  
     0.524
BD01_1711
Hypothetical protein; COG1700.
  
     0.522
BD01_0024
Phosphomannomutase; COG1109.
  
     0.521
Your Current Organism:
Thermococcus nautili
NCBI taxonomy Id: 195522
Other names: CNCM 4275, JCM 19601, T. nautili, Thermococcus nautili Gorlas et al. 2014, Thermococcus nautilus, Thermococcus sp. 30-1, strain 30-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.