STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD01_1649Putative dehydrogenase-related protein; COG0673. (336 aa)    
Predicted Functional Partners:
BD01_1648
Putative dehydrogenase-related protein; COG0673.
 
    
0.869
BD01_1650
Putative glycerate kinase; COG2379.
     
 0.784
BD01_0329
Sugar phosphate isomerase/epimerase; COG1082.
  
  
 0.738
BD01_1057
Sugar phosphate isomerase/epimerase; COG1082.
  
  
 0.738
BD01_1647
Glycosyltransferases involved in cell wall biogenesis; COG0463.
     
 0.719
BD01_0405
UDP-N-acetylglucosamine 2-epimerase; COG0381.
 
  
 0.684
BD01_1485
dTDP-D-glucose 4,6-dehydratase; COG1088.
  
  
 0.680
BD01_0406
UDP-N-acetyl-D-mannosaminuronate dehydrogenase; COG0677; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.653
BD01_1953
Sugar kinase, ribokinase family; COG0524; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.593
BD01_0877
NAD-dependent aldehyde dehydrogenase; COG1012; Belongs to the aldehyde dehydrogenase family.
  
  
 0.586
Your Current Organism:
Thermococcus nautili
NCBI taxonomy Id: 195522
Other names: CNCM 4275, JCM 19601, T. nautili, Thermococcus nautili Gorlas et al. 2014, Thermococcus nautilus, Thermococcus sp. 30-1, strain 30-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.