Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BD01_1950 | BD01_1952 | BD01_1950 | BD01_1952 | Uncharacterized protein conserved in archaea; COG4044. | Hypothetical protein. | 0.594 |
| BD01_1950 | tfe | BD01_1950 | BD01_1951 | Uncharacterized protein conserved in archaea; COG4044. | Transcription initiation factor IIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing [...] | 0.752 |
| BD01_1952 | BD01_1950 | BD01_1952 | BD01_1950 | Hypothetical protein. | Uncharacterized protein conserved in archaea; COG4044. | 0.594 |
| BD01_1952 | BD01_1953 | BD01_1952 | BD01_1953 | Hypothetical protein. | Sugar kinase, ribokinase family; COG0524; Belongs to the carbohydrate kinase PfkB family. | 0.687 |
| BD01_1952 | BD01_1954 | BD01_1952 | BD01_1954 | Hypothetical protein. | Putative regulator of amino acid metabolism, contains ACT domain; COG2150. | 0.436 |
| BD01_1952 | tfe | BD01_1952 | BD01_1951 | Hypothetical protein. | Transcription initiation factor IIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing [...] | 0.652 |
| BD01_1953 | BD01_1952 | BD01_1953 | BD01_1952 | Sugar kinase, ribokinase family; COG0524; Belongs to the carbohydrate kinase PfkB family. | Hypothetical protein. | 0.687 |
| BD01_1953 | BD01_1954 | BD01_1953 | BD01_1954 | Sugar kinase, ribokinase family; COG0524; Belongs to the carbohydrate kinase PfkB family. | Putative regulator of amino acid metabolism, contains ACT domain; COG2150. | 0.656 |
| BD01_1953 | tfe | BD01_1953 | BD01_1951 | Sugar kinase, ribokinase family; COG0524; Belongs to the carbohydrate kinase PfkB family. | Transcription initiation factor IIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing [...] | 0.406 |
| BD01_1954 | BD01_1952 | BD01_1954 | BD01_1952 | Putative regulator of amino acid metabolism, contains ACT domain; COG2150. | Hypothetical protein. | 0.436 |
| BD01_1954 | BD01_1953 | BD01_1954 | BD01_1953 | Putative regulator of amino acid metabolism, contains ACT domain; COG2150. | Sugar kinase, ribokinase family; COG0524; Belongs to the carbohydrate kinase PfkB family. | 0.656 |
| tfe | BD01_1950 | BD01_1951 | BD01_1950 | Transcription initiation factor IIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing [...] | Uncharacterized protein conserved in archaea; COG4044. | 0.752 |
| tfe | BD01_1952 | BD01_1951 | BD01_1952 | Transcription initiation factor IIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing [...] | Hypothetical protein. | 0.652 |
| tfe | BD01_1953 | BD01_1951 | BD01_1953 | Transcription initiation factor IIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing [...] | Sugar kinase, ribokinase family; COG0524; Belongs to the carbohydrate kinase PfkB family. | 0.406 |