STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BD01_2085CBS domain protein; COG0517. (280 aa)    
Predicted Functional Partners:
BD01_0350
CBS domain protein; COG0517.
 
    0.832
BD01_2086
Homoserine dehydrogenase; COG0460.
  
  
 0.766
BD01_2079
Putative ATPase involved in replication control, Cdc46/Mcm family; COG1241; Belongs to the MCM family.
       0.765
BD01_2081
Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta); COG4799.
  
  
 0.718
BD01_2083
Biotin carboxyl carrier protein; COG0511.
     
 0.707
BD01_2082
Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit; COG3630.
       0.696
BD01_2084
Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; COG1883.
       0.696
BD01_1181
Putative ATPase involved in replication control, Cdc46/Mcm family; COG1241; Belongs to the MCM family.
       0.667
BD01_0280
Universal stress protein UspA-related nucleotide-binding protein; COG0589.
 
  
 0.611
eif2b
Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-beta/eIF-5 family.
  
    0.527
Your Current Organism:
Thermococcus nautili
NCBI taxonomy Id: 195522
Other names: CNCM 4275, JCM 19601, T. nautili, Thermococcus nautili Gorlas et al. 2014, Thermococcus nautilus, Thermococcus sp. 30-1, strain 30-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.