Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BD01_2272 | BD01_2273 | Hypothetical protein. | Hypothetical protein. | 0.763 |
BD01_2272 | BD01_2274 | Hypothetical protein. | Deazaflavin-dependent nitroreductase family protein. | 0.763 |
BD01_2272 | BD01_2275 | Hypothetical protein. | Hypothetical protein. | 0.763 |
BD01_2272 | BD01_2276 | Hypothetical protein. | Protein conserved in hyperthermophilic archaea. | 0.752 |
BD01_2272 | BD01_2277 | Hypothetical protein. | C-terminal coiled-coil domain protein. | 0.752 |
BD01_2272 | BD01_2278 | Hypothetical protein. | Hypothetical protein. | 0.752 |
BD01_2272 | BD01_2279 | Hypothetical protein. | Hypothetical protein. | 0.754 |
BD01_2272 | BD01_2280 | Hypothetical protein. | SAM pointed domain-containing ETS-like transcription factor. | 0.751 |
BD01_2272 | BD01_2281 | Hypothetical protein. | Major capsid protein, double jelly roll fold. | 0.565 |
BD01_2272 | BD01_2282 | Hypothetical protein. | Hypothetical protein. | 0.494 |
BD01_2273 | BD01_2272 | Hypothetical protein. | Hypothetical protein. | 0.763 |
BD01_2273 | BD01_2274 | Hypothetical protein. | Deazaflavin-dependent nitroreductase family protein. | 0.785 |
BD01_2273 | BD01_2275 | Hypothetical protein. | Hypothetical protein. | 0.785 |
BD01_2273 | BD01_2276 | Hypothetical protein. | Protein conserved in hyperthermophilic archaea. | 0.773 |
BD01_2273 | BD01_2277 | Hypothetical protein. | C-terminal coiled-coil domain protein. | 0.773 |
BD01_2273 | BD01_2278 | Hypothetical protein. | Hypothetical protein. | 0.773 |
BD01_2273 | BD01_2279 | Hypothetical protein. | Hypothetical protein. | 0.776 |
BD01_2273 | BD01_2280 | Hypothetical protein. | SAM pointed domain-containing ETS-like transcription factor. | 0.773 |
BD01_2273 | BD01_2281 | Hypothetical protein. | Major capsid protein, double jelly roll fold. | 0.580 |
BD01_2273 | BD01_2282 | Hypothetical protein. | Hypothetical protein. | 0.507 |
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