Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OON60684.1 | OON62020.1 | B0920_17115 | B0920_00535 | Zinc metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.959 |
| OON60684.1 | OON62021.1 | B0920_17115 | B0920_00540 | Zinc metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology. | HflC protein; HflC and HflK could regulate a protease. | 0.959 |
| OON60684.1 | hflX | B0920_17115 | B0920_00530 | Zinc metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.562 |
| OON60684.1 | hfq | B0920_17115 | B0920_00525 | Zinc metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.562 |
| OON62020.1 | OON60684.1 | B0920_00535 | B0920_17115 | HflK protein; HflC and HflK could encode or regulate a protease. | Zinc metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.959 |
| OON62020.1 | OON62021.1 | B0920_00535 | B0920_00540 | HflK protein; HflC and HflK could encode or regulate a protease. | HflC protein; HflC and HflK could regulate a protease. | 0.999 |
| OON62020.1 | OON64348.1 | B0920_00535 | B0920_13775 | HflK protein; HflC and HflK could encode or regulate a protease. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.623 |
| OON62020.1 | OON64774.1 | B0920_00535 | B0920_14370 | HflK protein; HflC and HflK could encode or regulate a protease. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.595 |
| OON62020.1 | bamB | B0920_00535 | B0920_00515 | HflK protein; HflC and HflK could encode or regulate a protease. | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.734 |
| OON62020.1 | ftsH | B0920_00535 | B0920_08750 | HflK protein; HflC and HflK could encode or regulate a protease. | Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.994 |
| OON62020.1 | hflX | B0920_00535 | B0920_00530 | HflK protein; HflC and HflK could encode or regulate a protease. | GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.979 |
| OON62020.1 | hfq | B0920_00535 | B0920_00525 | HflK protein; HflC and HflK could encode or regulate a protease. | RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.842 |
| OON62020.1 | udk | B0920_00535 | B0920_01125 | HflK protein; HflC and HflK could encode or regulate a protease. | Uridine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.588 |
| OON62020.1 | yidC | B0920_00535 | B0920_24965 | HflK protein; HflC and HflK could encode or regulate a protease. | Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.824 |
| OON62021.1 | OON60684.1 | B0920_00540 | B0920_17115 | HflC protein; HflC and HflK could regulate a protease. | Zinc metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.959 |
| OON62021.1 | OON62020.1 | B0920_00540 | B0920_00535 | HflC protein; HflC and HflK could regulate a protease. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.999 |
| OON62021.1 | OON64348.1 | B0920_00540 | B0920_13775 | HflC protein; HflC and HflK could regulate a protease. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.623 |
| OON62021.1 | OON64774.1 | B0920_00540 | B0920_14370 | HflC protein; HflC and HflK could regulate a protease. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.595 |
| OON62021.1 | bamB | B0920_00540 | B0920_00515 | HflC protein; HflC and HflK could regulate a protease. | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.861 |
| OON62021.1 | ftsH | B0920_00540 | B0920_08750 | HflC protein; HflC and HflK could regulate a protease. | Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.989 |
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